Gene : Solyc08g078960.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR10972:SF88 - OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 2A-RELATED Description:  Oxysterol-binding family protein (AHRD V1 **** D7ME32_ARALY); contains Interpro domain(s) IPR000648 Oxysterol-binding protein
Genomic Order:  2023 Name:  ? Solyc08g078960.2
Secondary Identifier:  ? PAC:36151512
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g078960.2 0.5kb upstream 0.5kb upstream 6609 true SL2.50ch08: 62619356-62625964 Solanum lycopersicum
Solyc08g078960.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 62625465-62625964 Solanum lycopersicum
Solyc08g078960.2 0.5kb downstream 0.5kb downstream 6609 true SL2.50ch08: 62618856-62625464 Solanum lycopersicum
Solyc08g078960.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 62618856-62619355 Solanum lycopersicum
Solyc08g078960.2 1.0kb upstream 1.0kb upstream 7109 true SL2.50ch08: 62619356-62626464 Solanum lycopersicum
Solyc08g078960.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 62625465-62626464 Solanum lycopersicum
Solyc08g078960.2 1.0kb downstream 1.0kb downstream 7109 true SL2.50ch08: 62618356-62625464 Solanum lycopersicum
Solyc08g078960.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 62618356-62619355 Solanum lycopersicum
Solyc08g078960.2 2.0kb upstream 2.0kb upstream 8109 true SL2.50ch08: 62619356-62627464 Solanum lycopersicum
Solyc08g078960.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 62625465-62627464 Solanum lycopersicum
Solyc08g078960.2 2.0kb downstream 2.0kb downstream 8109 true SL2.50ch08: 62617356-62625464 Solanum lycopersicum
Solyc08g078960.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 62617356-62619355 Solanum lycopersicum
Solyc08g078960.2 5.0kb upstream 5.0kb upstream 11109 true SL2.50ch08: 62619356-62630464 Solanum lycopersicum
Solyc08g078960.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 62625465-62630464 Solanum lycopersicum
Solyc08g078960.2 5.0kb downstream 5.0kb downstream 11109 true SL2.50ch08: 62614356-62625464 Solanum lycopersicum
Solyc08g078960.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 62614356-62619355 Solanum lycopersicum
Solyc08g078960.2 10.0kb upstream 10.0kb upstream 16109 true SL2.50ch08: 62619356-62635464 Solanum lycopersicum
Solyc08g078960.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 62625465-62635464 Solanum lycopersicum
Solyc08g078960.2 10.0kb downstream 10.0kb downstream 16109 true SL2.50ch08: 62609356-62625464 Solanum lycopersicum
Solyc08g078960.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 62609356-62619355 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480460 5263 Asterids View MSA
123752299 5271 Pentapetalae View MSA
122791261 5272 Eudicot View MSA
122049875 5273 Angiosperm View MSA
121348074 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain