Gene : Solyc08g077800.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K10848 - DNA excision repair protein ERCC-4 (ERCC4, XPF) Description:  DNA repair endonuclease XPF (AHRD V1 **-* C1J9L6_LIZAU); contains Interpro domain(s) IPR006166 DNA repair nuclease, XPF-type/Helicase
Genomic Order:  1907 Name:  ? Solyc08g077800.2
Secondary Identifier:  ? PAC:36149506
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g077800.2 0.5kb upstream 0.5kb upstream 7096 true SL2.50ch08: 61707572-61714667 Solanum lycopersicum
Solyc08g077800.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 61707572-61708071 Solanum lycopersicum
Solyc08g077800.2 0.5kb downstream 0.5kb downstream 7096 true SL2.50ch08: 61708072-61715167 Solanum lycopersicum
Solyc08g077800.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 61714668-61715167 Solanum lycopersicum
Solyc08g077800.2 1.0kb upstream 1.0kb upstream 7596 true SL2.50ch08: 61707072-61714667 Solanum lycopersicum
Solyc08g077800.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 61707072-61708071 Solanum lycopersicum
Solyc08g077800.2 1.0kb downstream 1.0kb downstream 7596 true SL2.50ch08: 61708072-61715667 Solanum lycopersicum
Solyc08g077800.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 61714668-61715667 Solanum lycopersicum
Solyc08g077800.2 2.0kb upstream 2.0kb upstream 8596 true SL2.50ch08: 61706072-61714667 Solanum lycopersicum
Solyc08g077800.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 61706072-61708071 Solanum lycopersicum
Solyc08g077800.2 2.0kb downstream 2.0kb downstream 8596 true SL2.50ch08: 61708072-61716667 Solanum lycopersicum
Solyc08g077800.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 61714668-61716667 Solanum lycopersicum
Solyc08g077800.2 5.0kb upstream 5.0kb upstream 11596 true SL2.50ch08: 61703072-61714667 Solanum lycopersicum
Solyc08g077800.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 61703072-61708071 Solanum lycopersicum
Solyc08g077800.2 5.0kb downstream 5.0kb downstream 11596 true SL2.50ch08: 61708072-61719667 Solanum lycopersicum
Solyc08g077800.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 61714668-61719667 Solanum lycopersicum
Solyc08g077800.2 10.0kb upstream 10.0kb upstream 16596 true SL2.50ch08: 61698072-61714667 Solanum lycopersicum
Solyc08g077800.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 61698072-61708071 Solanum lycopersicum
Solyc08g077800.2 10.0kb downstream 10.0kb downstream 16596 true SL2.50ch08: 61708072-61724667 Solanum lycopersicum
Solyc08g077800.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 61714668-61724667 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026556 5273 Angiosperm View MSA
121474231 5263 Asterids View MSA
123749861 5271 Pentapetalae View MSA
122792541 5272 Eudicot View MSA
121346199 5274 Embryophyte View MSA
123424869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain