Gene : Solyc08g077750.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14845 - RAT1-interacting protein (RAI1, DOM3Z) Description:  Protein rai1 (AHRD V1 *--- C8V0J5_EMENI); contains Interpro domain(s) IPR013961 RAI1 like
Genomic Order:  1902 Name:  ? Solyc08g077750.2
Secondary Identifier:  ? PAC:36149662
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Ontology Annotation Displayer

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Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g077750.2 0.5kb upstream 0.5kb upstream 8079 true SL2.50ch08: 61643674-61651752 Solanum lycopersicum
Solyc08g077750.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 61651253-61651752 Solanum lycopersicum
Solyc08g077750.2 0.5kb downstream 0.5kb downstream 8079 true SL2.50ch08: 61643174-61651252 Solanum lycopersicum
Solyc08g077750.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 61643174-61643673 Solanum lycopersicum
Solyc08g077750.2 1.0kb upstream 1.0kb upstream 8579 true SL2.50ch08: 61643674-61652252 Solanum lycopersicum
Solyc08g077750.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 61651253-61652252 Solanum lycopersicum
Solyc08g077750.2 1.0kb downstream 1.0kb downstream 8579 true SL2.50ch08: 61642674-61651252 Solanum lycopersicum
Solyc08g077750.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 61642674-61643673 Solanum lycopersicum
Solyc08g077750.2 2.0kb upstream 2.0kb upstream 9579 true SL2.50ch08: 61643674-61653252 Solanum lycopersicum
Solyc08g077750.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 61651253-61653252 Solanum lycopersicum
Solyc08g077750.2 2.0kb downstream 2.0kb downstream 9579 true SL2.50ch08: 61641674-61651252 Solanum lycopersicum
Solyc08g077750.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 61641674-61643673 Solanum lycopersicum
Solyc08g077750.2 5.0kb upstream 5.0kb upstream 12579 true SL2.50ch08: 61643674-61656252 Solanum lycopersicum
Solyc08g077750.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 61651253-61656252 Solanum lycopersicum
Solyc08g077750.2 5.0kb downstream 5.0kb downstream 12579 true SL2.50ch08: 61638674-61651252 Solanum lycopersicum
Solyc08g077750.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 61638674-61643673 Solanum lycopersicum
Solyc08g077750.2 10.0kb upstream 10.0kb upstream 17579 true SL2.50ch08: 61643674-61661252 Solanum lycopersicum
Solyc08g077750.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 61651253-61661252 Solanum lycopersicum
Solyc08g077750.2 10.0kb downstream 10.0kb downstream 17579 true SL2.50ch08: 61633674-61651252 Solanum lycopersicum
Solyc08g077750.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 61633674-61643673 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469743 5263 Asterids View MSA
123741994 5271 Pentapetalae View MSA
122794748 5272 Eudicot View MSA
122048232 5273 Angiosperm View MSA
121348274 5274 Embryophyte View MSA
123425887 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain