Gene : Solyc08g078130.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 4.2.1.18 - Methylglutaconyl-CoA hydratase Description:  Fatty acid oxidation complex subunit alpha (AHRD V1 *-*- FADJ_VIBCH); contains Interpro domain(s) IPR001753 Crotonase, core
Genomic Order:  1940 Name:  ? Solyc08g078130.2
Secondary Identifier:  ? PAC:36149792
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LEU-DEG2-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g078130.2 0.5kb upstream 0.5kb upstream 4636 true SL2.50ch08: 61964301-61968936 Solanum lycopersicum
Solyc08g078130.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 61964301-61964800 Solanum lycopersicum
Solyc08g078130.2 0.5kb downstream 0.5kb downstream 4636 true SL2.50ch08: 61964801-61969436 Solanum lycopersicum
Solyc08g078130.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 61968937-61969436 Solanum lycopersicum
Solyc08g078130.2 1.0kb upstream 1.0kb upstream 5136 true SL2.50ch08: 61963801-61968936 Solanum lycopersicum
Solyc08g078130.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 61963801-61964800 Solanum lycopersicum
Solyc08g078130.2 1.0kb downstream 1.0kb downstream 5136 true SL2.50ch08: 61964801-61969936 Solanum lycopersicum
Solyc08g078130.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 61968937-61969936 Solanum lycopersicum
Solyc08g078130.2 2.0kb upstream 2.0kb upstream 6136 true SL2.50ch08: 61962801-61968936 Solanum lycopersicum
Solyc08g078130.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 61962801-61964800 Solanum lycopersicum
Solyc08g078130.2 2.0kb downstream 2.0kb downstream 6136 true SL2.50ch08: 61964801-61970936 Solanum lycopersicum
Solyc08g078130.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 61968937-61970936 Solanum lycopersicum
Solyc08g078130.2 5.0kb upstream 5.0kb upstream 9136 true SL2.50ch08: 61959801-61968936 Solanum lycopersicum
Solyc08g078130.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 61959801-61964800 Solanum lycopersicum
Solyc08g078130.2 5.0kb downstream 5.0kb downstream 9136 true SL2.50ch08: 61964801-61973936 Solanum lycopersicum
Solyc08g078130.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 61968937-61973936 Solanum lycopersicum
Solyc08g078130.2 10.0kb upstream 10.0kb upstream 14136 true SL2.50ch08: 61954801-61968936 Solanum lycopersicum
Solyc08g078130.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 61954801-61964800 Solanum lycopersicum
Solyc08g078130.2 10.0kb downstream 10.0kb downstream 14136 true SL2.50ch08: 61964801-61978936 Solanum lycopersicum
Solyc08g078130.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 61968937-61978936 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471390 5263 Asterids View MSA
123739015 5271 Pentapetalae View MSA
122790936 5272 Eudicot View MSA
122045797 5273 Angiosperm View MSA
121351751 5274 Embryophyte View MSA
123427880 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain