Gene : Solyc08g078100.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR11785//PTHR11785:SF355 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Description:  Amino acid permease-like protein (Fragment) (AHRD V1 *-*- B2ZME2_HELPE); contains Interpro domain(s) IPR002293 Amino acid/polyamine transporter I
Genomic Order:  1937 Name:  ? Solyc08g078100.1
Secondary Identifier:  ? PAC:36149914
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g078100.1 0.5kb upstream 0.5kb upstream 1907 true SL2.50ch08: 61950308-61952214 Solanum lycopersicum
Solyc08g078100.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 61950308-61950807 Solanum lycopersicum
Solyc08g078100.1 0.5kb downstream 0.5kb downstream 1907 true SL2.50ch08: 61950808-61952714 Solanum lycopersicum
Solyc08g078100.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 61952215-61952714 Solanum lycopersicum
Solyc08g078100.1 1.0kb upstream 1.0kb upstream 2407 true SL2.50ch08: 61949808-61952214 Solanum lycopersicum
Solyc08g078100.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 61949808-61950807 Solanum lycopersicum
Solyc08g078100.1 1.0kb downstream 1.0kb downstream 2407 true SL2.50ch08: 61950808-61953214 Solanum lycopersicum
Solyc08g078100.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 61952215-61953214 Solanum lycopersicum
Solyc08g078100.1 2.0kb upstream 2.0kb upstream 3407 true SL2.50ch08: 61948808-61952214 Solanum lycopersicum
Solyc08g078100.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 61948808-61950807 Solanum lycopersicum
Solyc08g078100.1 2.0kb downstream 2.0kb downstream 3407 true SL2.50ch08: 61950808-61954214 Solanum lycopersicum
Solyc08g078100.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 61952215-61954214 Solanum lycopersicum
Solyc08g078100.1 5.0kb upstream 5.0kb upstream 6407 true SL2.50ch08: 61945808-61952214 Solanum lycopersicum
Solyc08g078100.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 61945808-61950807 Solanum lycopersicum
Solyc08g078100.1 5.0kb downstream 5.0kb downstream 6407 true SL2.50ch08: 61950808-61957214 Solanum lycopersicum
Solyc08g078100.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 61952215-61957214 Solanum lycopersicum
Solyc08g078100.1 10.0kb upstream 10.0kb upstream 11407 true SL2.50ch08: 61940808-61952214 Solanum lycopersicum
Solyc08g078100.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 61940808-61950807 Solanum lycopersicum
Solyc08g078100.1 10.0kb downstream 10.0kb downstream 11407 true SL2.50ch08: 61950808-61962214 Solanum lycopersicum
Solyc08g078100.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 61952215-61962214 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121388886 5263 Asterids View MSA
123742789 5271 Pentapetalae View MSA
122791655 5272 Eudicot View MSA
122043396 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain