Gene : Solyc07g061780.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Description:  Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V1 *-** D7MB42_ARALY); contains Interpro domain(s) IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
Genomic Order:  2007 Name:  ? Solyc07g061780.2
Secondary Identifier:  ? PAC:36162015
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g061780.2 0.5kb upstream 0.5kb upstream 7741 true SL2.50ch07: 64732775-64740515 Solanum lycopersicum
Solyc07g061780.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 64732775-64733274 Solanum lycopersicum
Solyc07g061780.2 0.5kb downstream 0.5kb downstream 7741 true SL2.50ch07: 64733275-64741015 Solanum lycopersicum
Solyc07g061780.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 64740516-64741015 Solanum lycopersicum
Solyc07g061780.2 1.0kb upstream 1.0kb upstream 8241 true SL2.50ch07: 64732275-64740515 Solanum lycopersicum
Solyc07g061780.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 64732275-64733274 Solanum lycopersicum
Solyc07g061780.2 1.0kb downstream 1.0kb downstream 8241 true SL2.50ch07: 64733275-64741515 Solanum lycopersicum
Solyc07g061780.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 64740516-64741515 Solanum lycopersicum
Solyc07g061780.2 2.0kb upstream 2.0kb upstream 9241 true SL2.50ch07: 64731275-64740515 Solanum lycopersicum
Solyc07g061780.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 64731275-64733274 Solanum lycopersicum
Solyc07g061780.2 2.0kb downstream 2.0kb downstream 9241 true SL2.50ch07: 64733275-64742515 Solanum lycopersicum
Solyc07g061780.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 64740516-64742515 Solanum lycopersicum
Solyc07g061780.2 5.0kb upstream 5.0kb upstream 12241 true SL2.50ch07: 64728275-64740515 Solanum lycopersicum
Solyc07g061780.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 64728275-64733274 Solanum lycopersicum
Solyc07g061780.2 5.0kb downstream 5.0kb downstream 12241 true SL2.50ch07: 64733275-64745515 Solanum lycopersicum
Solyc07g061780.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 64740516-64745515 Solanum lycopersicum
Solyc07g061780.2 10.0kb upstream 10.0kb upstream 17241 true SL2.50ch07: 64723275-64740515 Solanum lycopersicum
Solyc07g061780.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 64723275-64733274 Solanum lycopersicum
Solyc07g061780.2 10.0kb downstream 10.0kb downstream 17241 true SL2.50ch07: 64733275-64750515 Solanum lycopersicum
Solyc07g061780.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 64740516-64750515 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470618 5263 Asterids View MSA
123741406 5271 Pentapetalae View MSA
122770044 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain