Gene : Solyc07g063440.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR13251 - EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 Description:  Trafficking protein particle complex subunit 10 (AHRD V1 *--- D3BI54_POLPA)
Genomic Order:  2173 Name:  ? Solyc07g063440.2
Secondary Identifier:  ? PAC:36161836
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g063440.2 0.5kb upstream 0.5kb upstream 15148 true SL2.50ch07: 65914611-65929758 Solanum lycopersicum
Solyc07g063440.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 65914611-65915110 Solanum lycopersicum
Solyc07g063440.2 0.5kb downstream 0.5kb downstream 15148 true SL2.50ch07: 65915111-65930258 Solanum lycopersicum
Solyc07g063440.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 65929759-65930258 Solanum lycopersicum
Solyc07g063440.2 1.0kb upstream 1.0kb upstream 15648 true SL2.50ch07: 65914111-65929758 Solanum lycopersicum
Solyc07g063440.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 65914111-65915110 Solanum lycopersicum
Solyc07g063440.2 1.0kb downstream 1.0kb downstream 15648 true SL2.50ch07: 65915111-65930758 Solanum lycopersicum
Solyc07g063440.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 65929759-65930758 Solanum lycopersicum
Solyc07g063440.2 2.0kb upstream 2.0kb upstream 16648 true SL2.50ch07: 65913111-65929758 Solanum lycopersicum
Solyc07g063440.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 65913111-65915110 Solanum lycopersicum
Solyc07g063440.2 2.0kb downstream 2.0kb downstream 16648 true SL2.50ch07: 65915111-65931758 Solanum lycopersicum
Solyc07g063440.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 65929759-65931758 Solanum lycopersicum
Solyc07g063440.2 5.0kb upstream 5.0kb upstream 19648 true SL2.50ch07: 65910111-65929758 Solanum lycopersicum
Solyc07g063440.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 65910111-65915110 Solanum lycopersicum
Solyc07g063440.2 5.0kb downstream 5.0kb downstream 19648 true SL2.50ch07: 65915111-65934758 Solanum lycopersicum
Solyc07g063440.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 65929759-65934758 Solanum lycopersicum
Solyc07g063440.2 10.0kb upstream 10.0kb upstream 24648 true SL2.50ch07: 65905111-65929758 Solanum lycopersicum
Solyc07g063440.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 65905111-65915110 Solanum lycopersicum
Solyc07g063440.2 10.0kb downstream 10.0kb downstream 24648 true SL2.50ch07: 65915111-65939758 Solanum lycopersicum
Solyc07g063440.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 65929759-65939758 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476683 5263 Asterids View MSA
123747515 5271 Pentapetalae View MSA
122790738 5272 Eudicot View MSA
122046287 5273 Angiosperm View MSA
121348694 5274 Embryophyte View MSA
123380976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain