Gene : Solyc07g062820.1 S. lycopersicum ITAG2.4
Defline:  (1 of 174) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat protein PPR1106-17 (AHRD V1 ***- B6SWY6_MAIZE); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  2111 Name:  ? Solyc07g062820.1
Secondary Identifier:  ? PAC:36162172
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g062820.1 0.5kb upstream 0.5kb upstream 2354 true SL2.50ch07: 65472320-65474673 Solanum lycopersicum
Solyc07g062820.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 65472320-65472819 Solanum lycopersicum
Solyc07g062820.1 0.5kb downstream 0.5kb downstream 2354 true SL2.50ch07: 65472820-65475173 Solanum lycopersicum
Solyc07g062820.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 65474674-65475173 Solanum lycopersicum
Solyc07g062820.1 1.0kb upstream 1.0kb upstream 2854 true SL2.50ch07: 65471820-65474673 Solanum lycopersicum
Solyc07g062820.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 65471820-65472819 Solanum lycopersicum
Solyc07g062820.1 1.0kb downstream 1.0kb downstream 2854 true SL2.50ch07: 65472820-65475673 Solanum lycopersicum
Solyc07g062820.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 65474674-65475673 Solanum lycopersicum
Solyc07g062820.1 2.0kb upstream 2.0kb upstream 3854 true SL2.50ch07: 65470820-65474673 Solanum lycopersicum
Solyc07g062820.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 65470820-65472819 Solanum lycopersicum
Solyc07g062820.1 2.0kb downstream 2.0kb downstream 3854 true SL2.50ch07: 65472820-65476673 Solanum lycopersicum
Solyc07g062820.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 65474674-65476673 Solanum lycopersicum
Solyc07g062820.1 5.0kb upstream 5.0kb upstream 6854 true SL2.50ch07: 65467820-65474673 Solanum lycopersicum
Solyc07g062820.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 65467820-65472819 Solanum lycopersicum
Solyc07g062820.1 5.0kb downstream 5.0kb downstream 6854 true SL2.50ch07: 65472820-65479673 Solanum lycopersicum
Solyc07g062820.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 65474674-65479673 Solanum lycopersicum
Solyc07g062820.1 10.0kb upstream 10.0kb upstream 11854 true SL2.50ch07: 65462820-65474673 Solanum lycopersicum
Solyc07g062820.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 65462820-65472819 Solanum lycopersicum
Solyc07g062820.1 10.0kb downstream 10.0kb downstream 11854 true SL2.50ch07: 65472820-65484673 Solanum lycopersicum
Solyc07g062820.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 65474674-65484673 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472177 5263 Asterids View MSA
123739429 5271 Pentapetalae View MSA
122786943 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain