Gene : Solyc07g062780.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR21330:SF2 - E3 SUMO-PROTEIN LIGASE MMS21 Description:  E3 SUMO-protein ligase NSE2 (AHRD V1 **** C3KJP6_ANOFI); contains Interpro domain(s) IPR004181 Zinc finger, MIZ-type
Genomic Order:  2107 Name:  ? Solyc07g062780.2
Secondary Identifier:  ? PAC:36161514
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g062780.2 0.5kb upstream 0.5kb upstream 3941 true SL2.50ch07: 65458196-65462136 Solanum lycopersicum
Solyc07g062780.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 65461637-65462136 Solanum lycopersicum
Solyc07g062780.2 0.5kb downstream 0.5kb downstream 3941 true SL2.50ch07: 65457696-65461636 Solanum lycopersicum
Solyc07g062780.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 65457696-65458195 Solanum lycopersicum
Solyc07g062780.2 1.0kb upstream 1.0kb upstream 4441 true SL2.50ch07: 65458196-65462636 Solanum lycopersicum
Solyc07g062780.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 65461637-65462636 Solanum lycopersicum
Solyc07g062780.2 1.0kb downstream 1.0kb downstream 4441 true SL2.50ch07: 65457196-65461636 Solanum lycopersicum
Solyc07g062780.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 65457196-65458195 Solanum lycopersicum
Solyc07g062780.2 2.0kb upstream 2.0kb upstream 5441 true SL2.50ch07: 65458196-65463636 Solanum lycopersicum
Solyc07g062780.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 65461637-65463636 Solanum lycopersicum
Solyc07g062780.2 2.0kb downstream 2.0kb downstream 5441 true SL2.50ch07: 65456196-65461636 Solanum lycopersicum
Solyc07g062780.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 65456196-65458195 Solanum lycopersicum
Solyc07g062780.2 5.0kb upstream 5.0kb upstream 8441 true SL2.50ch07: 65458196-65466636 Solanum lycopersicum
Solyc07g062780.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 65461637-65466636 Solanum lycopersicum
Solyc07g062780.2 5.0kb downstream 5.0kb downstream 8441 true SL2.50ch07: 65453196-65461636 Solanum lycopersicum
Solyc07g062780.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 65453196-65458195 Solanum lycopersicum
Solyc07g062780.2 10.0kb upstream 10.0kb upstream 13441 true SL2.50ch07: 65458196-65471636 Solanum lycopersicum
Solyc07g062780.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 65461637-65471636 Solanum lycopersicum
Solyc07g062780.2 10.0kb downstream 10.0kb downstream 13441 true SL2.50ch07: 65448196-65461636 Solanum lycopersicum
Solyc07g062780.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 65448196-65458195 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474247 5263 Asterids View MSA
123740450 5271 Pentapetalae View MSA
122790710 5272 Eudicot View MSA
122044966 5273 Angiosperm View MSA
121344157 5274 Embryophyte View MSA
123424394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain