Gene : Solyc07g054640.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR10632 - SULFIDE:QUINONE OXIDOREDUCTASE Description:  NADH dehydrogenase like protein (AHRD V1 **** O65414_ARATH); contains Interpro domain(s) IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Genomic Order:  1798 Name:  ? Solyc07g054640.1
Secondary Identifier:  ? PAC:36161009
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7279 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g054640.1 0.5kb upstream 0.5kb upstream 5837 true SL2.50ch07: 62905606-62911442 Solanum lycopersicum
Solyc07g054640.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 62905606-62906105 Solanum lycopersicum
Solyc07g054640.1 0.5kb downstream 0.5kb downstream 5837 true SL2.50ch07: 62906106-62911942 Solanum lycopersicum
Solyc07g054640.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 62911443-62911942 Solanum lycopersicum
Solyc07g054640.1 1.0kb upstream 1.0kb upstream 6337 true SL2.50ch07: 62905106-62911442 Solanum lycopersicum
Solyc07g054640.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 62905106-62906105 Solanum lycopersicum
Solyc07g054640.1 1.0kb downstream 1.0kb downstream 6337 true SL2.50ch07: 62906106-62912442 Solanum lycopersicum
Solyc07g054640.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 62911443-62912442 Solanum lycopersicum
Solyc07g054640.1 2.0kb upstream 2.0kb upstream 7337 true SL2.50ch07: 62904106-62911442 Solanum lycopersicum
Solyc07g054640.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 62904106-62906105 Solanum lycopersicum
Solyc07g054640.1 2.0kb downstream 2.0kb downstream 7337 true SL2.50ch07: 62906106-62913442 Solanum lycopersicum
Solyc07g054640.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 62911443-62913442 Solanum lycopersicum
Solyc07g054640.1 5.0kb upstream 5.0kb upstream 10337 true SL2.50ch07: 62901106-62911442 Solanum lycopersicum
Solyc07g054640.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 62901106-62906105 Solanum lycopersicum
Solyc07g054640.1 5.0kb downstream 5.0kb downstream 10337 true SL2.50ch07: 62906106-62916442 Solanum lycopersicum
Solyc07g054640.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 62911443-62916442 Solanum lycopersicum
Solyc07g054640.1 10.0kb upstream 10.0kb upstream 15337 true SL2.50ch07: 62896106-62911442 Solanum lycopersicum
Solyc07g054640.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 62896106-62906105 Solanum lycopersicum
Solyc07g054640.1 10.0kb downstream 10.0kb downstream 15337 true SL2.50ch07: 62906106-62921442 Solanum lycopersicum
Solyc07g054640.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 62911443-62921442 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121695840 5273 Angiosperm Singleton cluster - no MSA
121368928 5263 Asterids Singleton cluster - no MSA
123652058 5271 Pentapetalae Singleton cluster - no MSA
122685983 5272 Eudicot Singleton cluster - no MSA
121351811 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain