Gene : Solyc07g054390.1 S. lycopersicum ITAG2.4
Defline:  (1 of 6) PF04484 - Family of unknown function (DUF566) (DUF566) Description:  Os02g0794300 protein (Fragment) (AHRD V1 *--- Q0DWU9_ORYSJ); contains Interpro domain(s) IPR007573 Protein of unknown function DUF566
Genomic Order:  1776 Name:  ? Solyc07g054390.1
Secondary Identifier:  ? PAC:36160465
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g054390.1 0.5kb upstream 0.5kb upstream 2587 true SL2.50ch07: 62722650-62725236 Solanum lycopersicum
Solyc07g054390.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 62722650-62723149 Solanum lycopersicum
Solyc07g054390.1 0.5kb downstream 0.5kb downstream 2587 true SL2.50ch07: 62723150-62725736 Solanum lycopersicum
Solyc07g054390.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 62725237-62725736 Solanum lycopersicum
Solyc07g054390.1 1.0kb upstream 1.0kb upstream 3087 true SL2.50ch07: 62722150-62725236 Solanum lycopersicum
Solyc07g054390.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 62722150-62723149 Solanum lycopersicum
Solyc07g054390.1 1.0kb downstream 1.0kb downstream 3087 true SL2.50ch07: 62723150-62726236 Solanum lycopersicum
Solyc07g054390.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 62725237-62726236 Solanum lycopersicum
Solyc07g054390.1 2.0kb upstream 2.0kb upstream 4087 true SL2.50ch07: 62721150-62725236 Solanum lycopersicum
Solyc07g054390.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 62721150-62723149 Solanum lycopersicum
Solyc07g054390.1 2.0kb downstream 2.0kb downstream 4087 true SL2.50ch07: 62723150-62727236 Solanum lycopersicum
Solyc07g054390.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 62725237-62727236 Solanum lycopersicum
Solyc07g054390.1 5.0kb upstream 5.0kb upstream 7087 true SL2.50ch07: 62718150-62725236 Solanum lycopersicum
Solyc07g054390.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 62718150-62723149 Solanum lycopersicum
Solyc07g054390.1 5.0kb downstream 5.0kb downstream 7087 true SL2.50ch07: 62723150-62730236 Solanum lycopersicum
Solyc07g054390.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 62725237-62730236 Solanum lycopersicum
Solyc07g054390.1 10.0kb upstream 10.0kb upstream 12087 true SL2.50ch07: 62713150-62725236 Solanum lycopersicum
Solyc07g054390.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 62713150-62723149 Solanum lycopersicum
Solyc07g054390.1 10.0kb downstream 10.0kb downstream 12087 true SL2.50ch07: 62723150-62735236 Solanum lycopersicum
Solyc07g054390.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 62725237-62735236 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026460 5273 Angiosperm View MSA
121470285 5263 Asterids View MSA
123749787 5271 Pentapetalae View MSA
122794883 5272 Eudicot View MSA
121296342 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain