Gene : Solyc07g053920.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR31451:SF1 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Description:  Mannan endo-1 4-beta-mannosidase (AHRD V1 ***- A8FDC6_BACP2); contains Interpro domain(s) IPR001547 Glycoside hydrolase, family 5
Genomic Order:  1729 Name:  ? Solyc07g053920.2
Secondary Identifier:  ? PAC:36162199
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g053920.2 0.5kb upstream 0.5kb upstream 4379 true SL2.50ch07: 62333650-62338028 Solanum lycopersicum
Solyc07g053920.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 62337529-62338028 Solanum lycopersicum
Solyc07g053920.2 0.5kb downstream 0.5kb downstream 4379 true SL2.50ch07: 62333150-62337528 Solanum lycopersicum
Solyc07g053920.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 62333150-62333649 Solanum lycopersicum
Solyc07g053920.2 1.0kb upstream 1.0kb upstream 4879 true SL2.50ch07: 62333650-62338528 Solanum lycopersicum
Solyc07g053920.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 62337529-62338528 Solanum lycopersicum
Solyc07g053920.2 1.0kb downstream 1.0kb downstream 4879 true SL2.50ch07: 62332650-62337528 Solanum lycopersicum
Solyc07g053920.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 62332650-62333649 Solanum lycopersicum
Solyc07g053920.2 2.0kb upstream 2.0kb upstream 5879 true SL2.50ch07: 62333650-62339528 Solanum lycopersicum
Solyc07g053920.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 62337529-62339528 Solanum lycopersicum
Solyc07g053920.2 2.0kb downstream 2.0kb downstream 5879 true SL2.50ch07: 62331650-62337528 Solanum lycopersicum
Solyc07g053920.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 62331650-62333649 Solanum lycopersicum
Solyc07g053920.2 5.0kb upstream 5.0kb upstream 8879 true SL2.50ch07: 62333650-62342528 Solanum lycopersicum
Solyc07g053920.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 62337529-62342528 Solanum lycopersicum
Solyc07g053920.2 5.0kb downstream 5.0kb downstream 8879 true SL2.50ch07: 62328650-62337528 Solanum lycopersicum
Solyc07g053920.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 62328650-62333649 Solanum lycopersicum
Solyc07g053920.2 10.0kb upstream 10.0kb upstream 13879 true SL2.50ch07: 62333650-62347528 Solanum lycopersicum
Solyc07g053920.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 62337529-62347528 Solanum lycopersicum
Solyc07g053920.2 10.0kb downstream 10.0kb downstream 13879 true SL2.50ch07: 62323650-62337528 Solanum lycopersicum
Solyc07g053920.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 62323650-62333649 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471868 5263 Asterids View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain