Gene : Solyc07g042790.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF05970//PF08646//PF13604//PF14214 - PIF1-like helicase (PIF1) // Replication factor-A C terminal domain (Rep_fac-A_C) // AAA domain (AAA_30) // Helitron helicase-like domain at N-terminus (Helitron_like_N) Description:  Helicase-like protein (AHRD V1 ***- Q9AYF0_ORYSJ); contains Interpro domain(s) IPR010285 Protein of unknown function DUF889, eukaryote
Genomic Order:  1225 Name:  ? Solyc07g042790.1
Secondary Identifier:  ? PAC:36160255
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g042790.1 0.5kb upstream 0.5kb upstream 11474 true SL2.50ch07: 56283997-56295470 Solanum lycopersicum
Solyc07g042790.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 56283997-56284496 Solanum lycopersicum
Solyc07g042790.1 0.5kb downstream 0.5kb downstream 11474 true SL2.50ch07: 56284497-56295970 Solanum lycopersicum
Solyc07g042790.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 56295471-56295970 Solanum lycopersicum
Solyc07g042790.1 1.0kb upstream 1.0kb upstream 11974 true SL2.50ch07: 56283497-56295470 Solanum lycopersicum
Solyc07g042790.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 56283497-56284496 Solanum lycopersicum
Solyc07g042790.1 1.0kb downstream 1.0kb downstream 11974 true SL2.50ch07: 56284497-56296470 Solanum lycopersicum
Solyc07g042790.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 56295471-56296470 Solanum lycopersicum
Solyc07g042790.1 2.0kb upstream 2.0kb upstream 12974 true SL2.50ch07: 56282497-56295470 Solanum lycopersicum
Solyc07g042790.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 56282497-56284496 Solanum lycopersicum
Solyc07g042790.1 2.0kb downstream 2.0kb downstream 12974 true SL2.50ch07: 56284497-56297470 Solanum lycopersicum
Solyc07g042790.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 56295471-56297470 Solanum lycopersicum
Solyc07g042790.1 5.0kb upstream 5.0kb upstream 15974 true SL2.50ch07: 56279497-56295470 Solanum lycopersicum
Solyc07g042790.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 56279497-56284496 Solanum lycopersicum
Solyc07g042790.1 5.0kb downstream 5.0kb downstream 15974 true SL2.50ch07: 56284497-56300470 Solanum lycopersicum
Solyc07g042790.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 56295471-56300470 Solanum lycopersicum
Solyc07g042790.1 10.0kb upstream 10.0kb upstream 20974 true SL2.50ch07: 56274497-56295470 Solanum lycopersicum
Solyc07g042790.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 56274497-56284496 Solanum lycopersicum
Solyc07g042790.1 10.0kb downstream 10.0kb downstream 20974 true SL2.50ch07: 56284497-56305470 Solanum lycopersicum
Solyc07g042790.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 56295471-56305470 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
121476199 5263 Asterids View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain