Gene : Solyc07g042800.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR33650:SF1 - CEMA-LIKE PROTON EXTRUSION PROTEIN-LIKE PROTEIN Description:  cDNA clone J090072E23 full insert sequence (Fragment) (AHRD V1 *-*- B7F9R4_ORYSJ)
Genomic Order:  1226 Name:  ? Solyc07g042800.2
Secondary Identifier:  ? PAC:36162055
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g042800.2 0.5kb upstream 0.5kb upstream 2865 true SL2.50ch07: 56296534-56299398 Solanum lycopersicum
Solyc07g042800.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 56296534-56297033 Solanum lycopersicum
Solyc07g042800.2 0.5kb downstream 0.5kb downstream 2865 true SL2.50ch07: 56297034-56299898 Solanum lycopersicum
Solyc07g042800.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 56299399-56299898 Solanum lycopersicum
Solyc07g042800.2 1.0kb upstream 1.0kb upstream 3365 true SL2.50ch07: 56296034-56299398 Solanum lycopersicum
Solyc07g042800.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 56296034-56297033 Solanum lycopersicum
Solyc07g042800.2 1.0kb downstream 1.0kb downstream 3365 true SL2.50ch07: 56297034-56300398 Solanum lycopersicum
Solyc07g042800.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 56299399-56300398 Solanum lycopersicum
Solyc07g042800.2 2.0kb upstream 2.0kb upstream 4365 true SL2.50ch07: 56295034-56299398 Solanum lycopersicum
Solyc07g042800.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 56295034-56297033 Solanum lycopersicum
Solyc07g042800.2 2.0kb downstream 2.0kb downstream 4365 true SL2.50ch07: 56297034-56301398 Solanum lycopersicum
Solyc07g042800.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 56299399-56301398 Solanum lycopersicum
Solyc07g042800.2 5.0kb upstream 5.0kb upstream 7365 true SL2.50ch07: 56292034-56299398 Solanum lycopersicum
Solyc07g042800.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 56292034-56297033 Solanum lycopersicum
Solyc07g042800.2 5.0kb downstream 5.0kb downstream 7365 true SL2.50ch07: 56297034-56304398 Solanum lycopersicum
Solyc07g042800.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 56299399-56304398 Solanum lycopersicum
Solyc07g042800.2 10.0kb upstream 10.0kb upstream 12365 true SL2.50ch07: 56287034-56299398 Solanum lycopersicum
Solyc07g042800.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 56287034-56297033 Solanum lycopersicum
Solyc07g042800.2 10.0kb downstream 10.0kb downstream 12365 true SL2.50ch07: 56297034-56309398 Solanum lycopersicum
Solyc07g042800.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 56299399-56309398 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121369176 5263 Asterids Singleton cluster - no MSA
123744226 5271 Pentapetalae View MSA
122786508 5272 Eudicot View MSA
122044615 5273 Angiosperm View MSA
121350431 5274 Embryophyte View MSA
123427516 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain