Gene : Solyc07g042020.2 S. lycopersicum ITAG2.4
Defline:  (1 of 67) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Description:  Os12g0554100 protein (Fragment) (AHRD V1 *-*- Q0IMQ6_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plant
Genomic Order:  1152 Name:  ? Solyc07g042020.2
Secondary Identifier:  ? PAC:36162185
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g042020.2 0.5kb upstream 0.5kb upstream 4422 true SL2.50ch07: 54882610-54887031 Solanum lycopersicum
Solyc07g042020.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 54882610-54883109 Solanum lycopersicum
Solyc07g042020.2 0.5kb downstream 0.5kb downstream 4422 true SL2.50ch07: 54883110-54887531 Solanum lycopersicum
Solyc07g042020.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 54887032-54887531 Solanum lycopersicum
Solyc07g042020.2 1.0kb upstream 1.0kb upstream 4922 true SL2.50ch07: 54882110-54887031 Solanum lycopersicum
Solyc07g042020.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 54882110-54883109 Solanum lycopersicum
Solyc07g042020.2 1.0kb downstream 1.0kb downstream 4922 true SL2.50ch07: 54883110-54888031 Solanum lycopersicum
Solyc07g042020.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 54887032-54888031 Solanum lycopersicum
Solyc07g042020.2 2.0kb upstream 2.0kb upstream 5922 true SL2.50ch07: 54881110-54887031 Solanum lycopersicum
Solyc07g042020.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 54881110-54883109 Solanum lycopersicum
Solyc07g042020.2 2.0kb downstream 2.0kb downstream 5922 true SL2.50ch07: 54883110-54889031 Solanum lycopersicum
Solyc07g042020.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 54887032-54889031 Solanum lycopersicum
Solyc07g042020.2 5.0kb upstream 5.0kb upstream 8922 true SL2.50ch07: 54878110-54887031 Solanum lycopersicum
Solyc07g042020.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 54878110-54883109 Solanum lycopersicum
Solyc07g042020.2 5.0kb downstream 5.0kb downstream 8922 true SL2.50ch07: 54883110-54892031 Solanum lycopersicum
Solyc07g042020.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 54887032-54892031 Solanum lycopersicum
Solyc07g042020.2 10.0kb upstream 10.0kb upstream 13922 true SL2.50ch07: 54873110-54887031 Solanum lycopersicum
Solyc07g042020.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 54873110-54883109 Solanum lycopersicum
Solyc07g042020.2 10.0kb downstream 10.0kb downstream 13922 true SL2.50ch07: 54883110-54897031 Solanum lycopersicum
Solyc07g042020.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 54887032-54897031 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478569 5263 Asterids View MSA
123736665 5271 Pentapetalae View MSA
122795116 5272 Eudicot View MSA
122045954 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121351071 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain