Gene : Solyc07g042260.2 S. lycopersicum ITAG2.4

Defline:  (1 of 1) PTHR31384:SF21 - AUXIN RESPONSE FACTOR 19-RELATED Description:  Auxin response factor 1 (AHRD V1 *-*- Q6L8U3_CUCSA); contains Interpro domain(s) IPR010525 Auxin response factor
Genomic Order:  1175 Name:  ? Solyc07g042260.2
Secondary Identifier:  ? PAC:36161489

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g042260.2 0.5kb upstream 0.5kb upstream 7860 true SL2.50ch07: 55363905-55371764 Solanum lycopersicum
Solyc07g042260.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 55371265-55371764 Solanum lycopersicum
Solyc07g042260.2 0.5kb downstream 0.5kb downstream 7860 true SL2.50ch07: 55363405-55371264 Solanum lycopersicum
Solyc07g042260.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 55363405-55363904 Solanum lycopersicum
Solyc07g042260.2 1.0kb upstream 1.0kb upstream 8360 true SL2.50ch07: 55363905-55372264 Solanum lycopersicum
Solyc07g042260.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 55371265-55372264 Solanum lycopersicum
Solyc07g042260.2 1.0kb downstream 1.0kb downstream 8360 true SL2.50ch07: 55362905-55371264 Solanum lycopersicum
Solyc07g042260.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 55362905-55363904 Solanum lycopersicum
Solyc07g042260.2 2.0kb upstream 2.0kb upstream 9360 true SL2.50ch07: 55363905-55373264 Solanum lycopersicum
Solyc07g042260.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 55371265-55373264 Solanum lycopersicum
Solyc07g042260.2 2.0kb downstream 2.0kb downstream 9360 true SL2.50ch07: 55361905-55371264 Solanum lycopersicum
Solyc07g042260.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 55361905-55363904 Solanum lycopersicum
Solyc07g042260.2 5.0kb upstream 5.0kb upstream 12360 true SL2.50ch07: 55363905-55376264 Solanum lycopersicum
Solyc07g042260.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 55371265-55376264 Solanum lycopersicum
Solyc07g042260.2 5.0kb downstream 5.0kb downstream 12360 true SL2.50ch07: 55358905-55371264 Solanum lycopersicum
Solyc07g042260.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 55358905-55363904 Solanum lycopersicum
Solyc07g042260.2 10.0kb upstream 10.0kb upstream 17360 true SL2.50ch07: 55363905-55381264 Solanum lycopersicum
Solyc07g042260.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 55371265-55381264 Solanum lycopersicum
Solyc07g042260.2 10.0kb downstream 10.0kb downstream 17360 true SL2.50ch07: 55353905-55371264 Solanum lycopersicum
Solyc07g042260.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 55353905-55363904 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479593 5263 Asterids View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain