Gene : Solyc07g047780.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR21736:SF20 - PROTEIN OBERON 1-RELATED Description:  CONSTANS interacting protein 6 (Fragment) (AHRD V1 **-- Q2VY13_SOLLC); contains Interpro domain(s) IPR004082 Protein of unknown function DUF1423, plant
Genomic Order:  1420 Name:  ? Solyc07g047780.2
Secondary Identifier:  ? PAC:36161381
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g047780.2 0.5kb upstream 0.5kb upstream 5538 true SL2.50ch07: 58995343-59000880 Solanum lycopersicum
Solyc07g047780.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 59000381-59000880 Solanum lycopersicum
Solyc07g047780.2 0.5kb downstream 0.5kb downstream 5538 true SL2.50ch07: 58994843-59000380 Solanum lycopersicum
Solyc07g047780.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 58994843-58995342 Solanum lycopersicum
Solyc07g047780.2 1.0kb upstream 1.0kb upstream 6038 true SL2.50ch07: 58995343-59001380 Solanum lycopersicum
Solyc07g047780.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 59000381-59001380 Solanum lycopersicum
Solyc07g047780.2 1.0kb downstream 1.0kb downstream 6038 true SL2.50ch07: 58994343-59000380 Solanum lycopersicum
Solyc07g047780.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 58994343-58995342 Solanum lycopersicum
Solyc07g047780.2 2.0kb upstream 2.0kb upstream 7038 true SL2.50ch07: 58995343-59002380 Solanum lycopersicum
Solyc07g047780.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 59000381-59002380 Solanum lycopersicum
Solyc07g047780.2 2.0kb downstream 2.0kb downstream 7038 true SL2.50ch07: 58993343-59000380 Solanum lycopersicum
Solyc07g047780.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 58993343-58995342 Solanum lycopersicum
Solyc07g047780.2 5.0kb upstream 5.0kb upstream 10038 true SL2.50ch07: 58995343-59005380 Solanum lycopersicum
Solyc07g047780.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 59000381-59005380 Solanum lycopersicum
Solyc07g047780.2 5.0kb downstream 5.0kb downstream 10038 true SL2.50ch07: 58990343-59000380 Solanum lycopersicum
Solyc07g047780.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 58990343-58995342 Solanum lycopersicum
Solyc07g047780.2 10.0kb upstream 10.0kb upstream 15038 true SL2.50ch07: 58995343-59010380 Solanum lycopersicum
Solyc07g047780.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 59000381-59010380 Solanum lycopersicum
Solyc07g047780.2 10.0kb downstream 10.0kb downstream 15038 true SL2.50ch07: 58985343-59000380 Solanum lycopersicum
Solyc07g047780.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 58985343-58995342 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121389065 5263 Asterids View MSA
123747254 5271 Pentapetalae View MSA
122789487 5272 Eudicot View MSA
122041658 5273 Angiosperm View MSA
121346503 5274 Embryophyte View MSA
123380393 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain