Gene : Solyc07g048100.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR15321 - TUMOR SUPPRESSOR P53-BINDING PROTEIN 1 Description:  BRCA1 C Terminus domain containing protein expressed (AHRD V1 *-*- Q6ATS1_ORYSJ); contains Interpro domain(s) IPR001357 BRCT
Genomic Order:  1451 Name:  ? Solyc07g048100.1
Secondary Identifier:  ? PAC:36161590
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g048100.1 0.5kb upstream 0.5kb upstream 12266 true SL2.50ch07: 59283646-59295911 Solanum lycopersicum
Solyc07g048100.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 59283646-59284145 Solanum lycopersicum
Solyc07g048100.1 0.5kb downstream 0.5kb downstream 12266 true SL2.50ch07: 59284146-59296411 Solanum lycopersicum
Solyc07g048100.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 59295912-59296411 Solanum lycopersicum
Solyc07g048100.1 1.0kb upstream 1.0kb upstream 12766 true SL2.50ch07: 59283146-59295911 Solanum lycopersicum
Solyc07g048100.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 59283146-59284145 Solanum lycopersicum
Solyc07g048100.1 1.0kb downstream 1.0kb downstream 12766 true SL2.50ch07: 59284146-59296911 Solanum lycopersicum
Solyc07g048100.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 59295912-59296911 Solanum lycopersicum
Solyc07g048100.1 2.0kb upstream 2.0kb upstream 13766 true SL2.50ch07: 59282146-59295911 Solanum lycopersicum
Solyc07g048100.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 59282146-59284145 Solanum lycopersicum
Solyc07g048100.1 2.0kb downstream 2.0kb downstream 13766 true SL2.50ch07: 59284146-59297911 Solanum lycopersicum
Solyc07g048100.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 59295912-59297911 Solanum lycopersicum
Solyc07g048100.1 5.0kb upstream 5.0kb upstream 16766 true SL2.50ch07: 59279146-59295911 Solanum lycopersicum
Solyc07g048100.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 59279146-59284145 Solanum lycopersicum
Solyc07g048100.1 5.0kb downstream 5.0kb downstream 16766 true SL2.50ch07: 59284146-59300911 Solanum lycopersicum
Solyc07g048100.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 59295912-59300911 Solanum lycopersicum
Solyc07g048100.1 10.0kb upstream 10.0kb upstream 21766 true SL2.50ch07: 59274146-59295911 Solanum lycopersicum
Solyc07g048100.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 59274146-59284145 Solanum lycopersicum
Solyc07g048100.1 10.0kb downstream 10.0kb downstream 21766 true SL2.50ch07: 59284146-59305911 Solanum lycopersicum
Solyc07g048100.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 59295912-59305911 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477936 5263 Asterids View MSA
123750519 5271 Pentapetalae View MSA
122797357 5272 Eudicot View MSA
122048777 5273 Angiosperm View MSA
121349208 5274 Embryophyte View MSA
123381216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain