Gene : Solyc07g045380.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF00637//PF01535//PF13041 - Region in Clathrin and VPS (Clathrin) // PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KF62_ARALY); contains Interpro domain(s) IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
Genomic Order:  1380 Name:  ? Solyc07g045380.2
Secondary Identifier:  ? PAC:36161257
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g045380.2 0.5kb upstream 0.5kb upstream 5545 true SL2.50ch07: 58491203-58496747 Solanum lycopersicum
Solyc07g045380.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 58491203-58491702 Solanum lycopersicum
Solyc07g045380.2 0.5kb downstream 0.5kb downstream 5545 true SL2.50ch07: 58491703-58497247 Solanum lycopersicum
Solyc07g045380.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 58496748-58497247 Solanum lycopersicum
Solyc07g045380.2 1.0kb upstream 1.0kb upstream 6045 true SL2.50ch07: 58490703-58496747 Solanum lycopersicum
Solyc07g045380.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 58490703-58491702 Solanum lycopersicum
Solyc07g045380.2 1.0kb downstream 1.0kb downstream 6045 true SL2.50ch07: 58491703-58497747 Solanum lycopersicum
Solyc07g045380.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 58496748-58497747 Solanum lycopersicum
Solyc07g045380.2 2.0kb upstream 2.0kb upstream 7045 true SL2.50ch07: 58489703-58496747 Solanum lycopersicum
Solyc07g045380.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 58489703-58491702 Solanum lycopersicum
Solyc07g045380.2 2.0kb downstream 2.0kb downstream 7045 true SL2.50ch07: 58491703-58498747 Solanum lycopersicum
Solyc07g045380.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 58496748-58498747 Solanum lycopersicum
Solyc07g045380.2 5.0kb upstream 5.0kb upstream 10045 true SL2.50ch07: 58486703-58496747 Solanum lycopersicum
Solyc07g045380.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 58486703-58491702 Solanum lycopersicum
Solyc07g045380.2 5.0kb downstream 5.0kb downstream 10045 true SL2.50ch07: 58491703-58501747 Solanum lycopersicum
Solyc07g045380.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 58496748-58501747 Solanum lycopersicum
Solyc07g045380.2 10.0kb upstream 10.0kb upstream 15045 true SL2.50ch07: 58481703-58496747 Solanum lycopersicum
Solyc07g045380.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 58481703-58491702 Solanum lycopersicum
Solyc07g045380.2 10.0kb downstream 10.0kb downstream 15045 true SL2.50ch07: 58491703-58506747 Solanum lycopersicum
Solyc07g045380.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 58496748-58506747 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474720 5263 Asterids View MSA
123740694 5271 Pentapetalae View MSA
122786557 5272 Eudicot View MSA
122042535 5273 Angiosperm View MSA
121309984 5274 Embryophyte View MSA
123347596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain