Gene : Solyc03g033980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PTHR16517:SF40 - TUBBY-LIKE F-BOX PROTEIN 11-RELATED Description:  Tubby-like F-box protein 5 (AHRD V1 ***- TLP5_ORYSJ); contains Interpro domain(s) IPR000007 Tubby, C-terminal
Genomic Order:  591 Name:  ? Solyc03g033980.2
Secondary Identifier:  ? PAC:36135887
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g033980.2 0.5kb upstream 0.5kb upstream 2729 true SL2.50ch03: 5676157-5678885 Solanum lycopersicum
Solyc03g033980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 5676157-5676656 Solanum lycopersicum
Solyc03g033980.2 0.5kb downstream 0.5kb downstream 2729 true SL2.50ch03: 5676657-5679385 Solanum lycopersicum
Solyc03g033980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 5678886-5679385 Solanum lycopersicum
Solyc03g033980.2 1.0kb upstream 1.0kb upstream 3229 true SL2.50ch03: 5675657-5678885 Solanum lycopersicum
Solyc03g033980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 5675657-5676656 Solanum lycopersicum
Solyc03g033980.2 1.0kb downstream 1.0kb downstream 3229 true SL2.50ch03: 5676657-5679885 Solanum lycopersicum
Solyc03g033980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 5678886-5679885 Solanum lycopersicum
Solyc03g033980.2 2.0kb upstream 2.0kb upstream 4229 true SL2.50ch03: 5674657-5678885 Solanum lycopersicum
Solyc03g033980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 5674657-5676656 Solanum lycopersicum
Solyc03g033980.2 2.0kb downstream 2.0kb downstream 4229 true SL2.50ch03: 5676657-5680885 Solanum lycopersicum
Solyc03g033980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 5678886-5680885 Solanum lycopersicum
Solyc03g033980.2 5.0kb upstream 5.0kb upstream 7229 true SL2.50ch03: 5671657-5678885 Solanum lycopersicum
Solyc03g033980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 5671657-5676656 Solanum lycopersicum
Solyc03g033980.2 5.0kb downstream 5.0kb downstream 7229 true SL2.50ch03: 5676657-5683885 Solanum lycopersicum
Solyc03g033980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 5678886-5683885 Solanum lycopersicum
Solyc03g033980.2 10.0kb upstream 10.0kb upstream 12229 true SL2.50ch03: 5666657-5678885 Solanum lycopersicum
Solyc03g033980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 5666657-5676656 Solanum lycopersicum
Solyc03g033980.2 10.0kb downstream 10.0kb downstream 12229 true SL2.50ch03: 5676657-5688885 Solanum lycopersicum
Solyc03g033980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 5678886-5688885 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479357 5263 Asterids View MSA
123747341 5271 Pentapetalae View MSA
122790799 5272 Eudicot View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain