Gene : Solyc03g053110.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR12231:SF111 - MATRIX-REMODELING-ASSOCIATED PROTEIN 8 Description:  Rhodanese-like family protein-like protein (Fragment) (AHRD V1 *-*- A7KNZ8_GOSBA); contains Interpro domain(s) IPR001763 Rhodanese-like
Genomic Order:  939 Name:  ? Solyc03g053110.2
Secondary Identifier:  ? PAC:36135324
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g053110.2 0.5kb upstream 0.5kb upstream 3872 true SL2.50ch03: 22111177-22115048 Solanum lycopersicum
Solyc03g053110.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 22114549-22115048 Solanum lycopersicum
Solyc03g053110.2 0.5kb downstream 0.5kb downstream 3872 true SL2.50ch03: 22110677-22114548 Solanum lycopersicum
Solyc03g053110.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 22110677-22111176 Solanum lycopersicum
Solyc03g053110.2 1.0kb upstream 1.0kb upstream 4372 true SL2.50ch03: 22111177-22115548 Solanum lycopersicum
Solyc03g053110.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 22114549-22115548 Solanum lycopersicum
Solyc03g053110.2 1.0kb downstream 1.0kb downstream 4372 true SL2.50ch03: 22110177-22114548 Solanum lycopersicum
Solyc03g053110.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 22110177-22111176 Solanum lycopersicum
Solyc03g053110.2 2.0kb upstream 2.0kb upstream 5372 true SL2.50ch03: 22111177-22116548 Solanum lycopersicum
Solyc03g053110.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 22114549-22116548 Solanum lycopersicum
Solyc03g053110.2 2.0kb downstream 2.0kb downstream 5372 true SL2.50ch03: 22109177-22114548 Solanum lycopersicum
Solyc03g053110.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 22109177-22111176 Solanum lycopersicum
Solyc03g053110.2 5.0kb upstream 5.0kb upstream 8372 true SL2.50ch03: 22111177-22119548 Solanum lycopersicum
Solyc03g053110.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 22114549-22119548 Solanum lycopersicum
Solyc03g053110.2 5.0kb downstream 5.0kb downstream 8372 true SL2.50ch03: 22106177-22114548 Solanum lycopersicum
Solyc03g053110.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 22106177-22111176 Solanum lycopersicum
Solyc03g053110.2 10.0kb upstream 10.0kb upstream 13372 true SL2.50ch03: 22111177-22124548 Solanum lycopersicum
Solyc03g053110.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 22114549-22124548 Solanum lycopersicum
Solyc03g053110.2 10.0kb downstream 10.0kb downstream 13372 true SL2.50ch03: 22101177-22114548 Solanum lycopersicum
Solyc03g053110.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 22101177-22111176 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469990 5263 Asterids View MSA
123738309 5271 Pentapetalae View MSA
122792566 5272 Eudicot View MSA
122046652 5273 Angiosperm View MSA
121347654 5274 Embryophyte View MSA
123380591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain