Gene : Solyc03g005880.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR10791//PTHR10791:SF23 - RAG1-ACTIVATING PROTEIN 1 // SUBFAMILY NOT NAMED Description:  Nodulin MtN3 family protein (AHRD V1 **-- D7L372_ARALY); contains Interpro domain(s) IPR018179 RAG1-activating protein 1 homologue
Genomic Order:  89 Name:  ? Solyc03g005880.2
Secondary Identifier:  ? PAC:36135008
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g005880.2 0.5kb upstream 0.5kb upstream 2835 true SL2.50ch03: 593520-596354 Solanum lycopersicum
Solyc03g005880.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 595855-596354 Solanum lycopersicum
Solyc03g005880.2 0.5kb downstream 0.5kb downstream 2835 true SL2.50ch03: 593020-595854 Solanum lycopersicum
Solyc03g005880.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 593020-593519 Solanum lycopersicum
Solyc03g005880.2 1.0kb upstream 1.0kb upstream 3335 true SL2.50ch03: 593520-596854 Solanum lycopersicum
Solyc03g005880.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 595855-596854 Solanum lycopersicum
Solyc03g005880.2 1.0kb downstream 1.0kb downstream 3335 true SL2.50ch03: 592520-595854 Solanum lycopersicum
Solyc03g005880.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 592520-593519 Solanum lycopersicum
Solyc03g005880.2 2.0kb upstream 2.0kb upstream 4335 true SL2.50ch03: 593520-597854 Solanum lycopersicum
Solyc03g005880.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 595855-597854 Solanum lycopersicum
Solyc03g005880.2 2.0kb downstream 2.0kb downstream 4335 true SL2.50ch03: 591520-595854 Solanum lycopersicum
Solyc03g005880.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 591520-593519 Solanum lycopersicum
Solyc03g005880.2 5.0kb upstream 5.0kb upstream 7335 true SL2.50ch03: 593520-600854 Solanum lycopersicum
Solyc03g005880.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 595855-600854 Solanum lycopersicum
Solyc03g005880.2 5.0kb downstream 5.0kb downstream 7335 true SL2.50ch03: 588520-595854 Solanum lycopersicum
Solyc03g005880.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 588520-593519 Solanum lycopersicum
Solyc03g005880.2 10.0kb upstream 10.0kb upstream 12335 true SL2.50ch03: 593520-605854 Solanum lycopersicum
Solyc03g005880.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 595855-605854 Solanum lycopersicum
Solyc03g005880.2 10.0kb downstream 10.0kb downstream 12335 true SL2.50ch03: 583520-595854 Solanum lycopersicum
Solyc03g005880.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 583520-593519 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414485 5263 Asterids View MSA
123749486 5271 Pentapetalae View MSA
122796562 5272 Eudicot View MSA
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain