Gene : Solyc03g005280.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR13683//PTHR13683:SF301 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED Description:  Aspartic proteinase 2 (AHRD V1 **-* Q948P0_SOYBN); contains Interpro domain(s) IPR001461 Peptidase A1
Genomic Order:  29 Name:  ? Solyc03g005280.2
Secondary Identifier:  ? PAC:36136436
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g005280.2 0.5kb upstream 0.5kb upstream 4177 true SL2.50ch03: 161169-165345 Solanum lycopersicum
Solyc03g005280.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 164846-165345 Solanum lycopersicum
Solyc03g005280.2 0.5kb downstream 0.5kb downstream 4177 true SL2.50ch03: 160669-164845 Solanum lycopersicum
Solyc03g005280.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 160669-161168 Solanum lycopersicum
Solyc03g005280.2 1.0kb upstream 1.0kb upstream 4677 true SL2.50ch03: 161169-165845 Solanum lycopersicum
Solyc03g005280.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 164846-165845 Solanum lycopersicum
Solyc03g005280.2 1.0kb downstream 1.0kb downstream 4677 true SL2.50ch03: 160169-164845 Solanum lycopersicum
Solyc03g005280.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 160169-161168 Solanum lycopersicum
Solyc03g005280.2 2.0kb upstream 2.0kb upstream 5677 true SL2.50ch03: 161169-166845 Solanum lycopersicum
Solyc03g005280.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 164846-166845 Solanum lycopersicum
Solyc03g005280.2 2.0kb downstream 2.0kb downstream 5677 true SL2.50ch03: 159169-164845 Solanum lycopersicum
Solyc03g005280.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 159169-161168 Solanum lycopersicum
Solyc03g005280.2 5.0kb upstream 5.0kb upstream 8677 true SL2.50ch03: 161169-169845 Solanum lycopersicum
Solyc03g005280.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 164846-169845 Solanum lycopersicum
Solyc03g005280.2 5.0kb downstream 5.0kb downstream 8677 true SL2.50ch03: 156169-164845 Solanum lycopersicum
Solyc03g005280.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 156169-161168 Solanum lycopersicum
Solyc03g005280.2 10.0kb upstream 10.0kb upstream 13677 true SL2.50ch03: 161169-174845 Solanum lycopersicum
Solyc03g005280.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 164846-174845 Solanum lycopersicum
Solyc03g005280.2 10.0kb downstream 10.0kb downstream 13677 true SL2.50ch03: 151169-164845 Solanum lycopersicum
Solyc03g005280.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 151169-161168 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780043 5273 Angiosperm View MSA
121387368 5263 Asterids View MSA
123744877 5271 Pentapetalae View MSA
122771281 5272 Eudicot View MSA
121051677 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain