Gene : Solyc03g005120.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K12386 - cystinosin (CTNS) Description:  Cystine transporter Cystinosin (AHRD V1 **** Q2URL9_ASPOR); contains Interpro domain(s) IPR005282 Lysosomal cystine transporter
Genomic Order:  13 Name:  ? Solyc03g005120.2
Secondary Identifier:  ? PAC:36133967
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g005120.2 0.5kb upstream 0.5kb upstream 3909 true SL2.50ch03: 77827-81735 Solanum lycopersicum
Solyc03g005120.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 81236-81735 Solanum lycopersicum
Solyc03g005120.2 0.5kb downstream 0.5kb downstream 3909 true SL2.50ch03: 77327-81235 Solanum lycopersicum
Solyc03g005120.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 77327-77826 Solanum lycopersicum
Solyc03g005120.2 1.0kb upstream 1.0kb upstream 4409 true SL2.50ch03: 77827-82235 Solanum lycopersicum
Solyc03g005120.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 81236-82235 Solanum lycopersicum
Solyc03g005120.2 1.0kb downstream 1.0kb downstream 4409 true SL2.50ch03: 76827-81235 Solanum lycopersicum
Solyc03g005120.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 76827-77826 Solanum lycopersicum
Solyc03g005120.2 2.0kb upstream 2.0kb upstream 5409 true SL2.50ch03: 77827-83235 Solanum lycopersicum
Solyc03g005120.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 81236-83235 Solanum lycopersicum
Solyc03g005120.2 2.0kb downstream 2.0kb downstream 5409 true SL2.50ch03: 75827-81235 Solanum lycopersicum
Solyc03g005120.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 75827-77826 Solanum lycopersicum
Solyc03g005120.2 5.0kb upstream 5.0kb upstream 8409 true SL2.50ch03: 77827-86235 Solanum lycopersicum
Solyc03g005120.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 81236-86235 Solanum lycopersicum
Solyc03g005120.2 5.0kb downstream 5.0kb downstream 8409 true SL2.50ch03: 72827-81235 Solanum lycopersicum
Solyc03g005120.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 72827-77826 Solanum lycopersicum
Solyc03g005120.2 10.0kb upstream 10.0kb upstream 13409 true SL2.50ch03: 77827-91235 Solanum lycopersicum
Solyc03g005120.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 81236-91235 Solanum lycopersicum
Solyc03g005120.2 10.0kb downstream 10.0kb downstream 13409 true SL2.50ch03: 67827-81235 Solanum lycopersicum
Solyc03g005120.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 67827-77826 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468954 5263 Asterids View MSA
123752283 5271 Pentapetalae View MSA
122786294 5272 Eudicot View MSA
122043856 5273 Angiosperm View MSA
121344453 5274 Embryophyte View MSA
123380048 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain