Gene : Solyc03g005730.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K01703 - 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit (leuC) Description:  3-isopropylmalate dehydratase large subunit 2 (AHRD V1 ***- B6U6T6_MAIZE); contains Interpro domain(s) IPR011826 Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic
Genomic Order:  74 Name:  ? Solyc03g005730.2
Secondary Identifier:  ? PAC:36135769
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum BRANCHED-CHAIN-AA-SYN-PWY Solanum lycopersicum pathologic  
Slycopersicum LEUSYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g005730.2 0.5kb upstream 0.5kb upstream 8894 true SL2.50ch03: 509260-518153 Solanum lycopersicum
Solyc03g005730.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 517654-518153 Solanum lycopersicum
Solyc03g005730.2 0.5kb downstream 0.5kb downstream 8894 true SL2.50ch03: 508760-517653 Solanum lycopersicum
Solyc03g005730.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 508760-509259 Solanum lycopersicum
Solyc03g005730.2 1.0kb upstream 1.0kb upstream 9394 true SL2.50ch03: 509260-518653 Solanum lycopersicum
Solyc03g005730.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 517654-518653 Solanum lycopersicum
Solyc03g005730.2 1.0kb downstream 1.0kb downstream 9394 true SL2.50ch03: 508260-517653 Solanum lycopersicum
Solyc03g005730.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 508260-509259 Solanum lycopersicum
Solyc03g005730.2 2.0kb upstream 2.0kb upstream 10394 true SL2.50ch03: 509260-519653 Solanum lycopersicum
Solyc03g005730.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 517654-519653 Solanum lycopersicum
Solyc03g005730.2 2.0kb downstream 2.0kb downstream 10394 true SL2.50ch03: 507260-517653 Solanum lycopersicum
Solyc03g005730.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 507260-509259 Solanum lycopersicum
Solyc03g005730.2 5.0kb upstream 5.0kb upstream 13394 true SL2.50ch03: 509260-522653 Solanum lycopersicum
Solyc03g005730.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 517654-522653 Solanum lycopersicum
Solyc03g005730.2 5.0kb downstream 5.0kb downstream 13394 true SL2.50ch03: 504260-517653 Solanum lycopersicum
Solyc03g005730.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 504260-509259 Solanum lycopersicum
Solyc03g005730.2 10.0kb upstream 10.0kb upstream 18394 true SL2.50ch03: 509260-527653 Solanum lycopersicum
Solyc03g005730.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 517654-527653 Solanum lycopersicum
Solyc03g005730.2 10.0kb downstream 10.0kb downstream 18394 true SL2.50ch03: 499260-517653 Solanum lycopersicum
Solyc03g005730.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 499260-509259 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469196 5263 Asterids View MSA
123737905 5271 Pentapetalae View MSA
122792861 5272 Eudicot View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain