Gene : Solyc03g005460.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K15505 - DNA repair protein RAD5 [EC:3.6.4.-] (RAD5) Description:  DNA helicase (AHRD V1 **-- C4R4A1_PICPG); contains Interpro domain(s) IPR000330 SNF2-related
Genomic Order:  47 Name:  ? Solyc03g005460.2
Secondary Identifier:  ? PAC:36135491
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g005460.2 0.5kb upstream 0.5kb upstream 7778 true SL2.50ch03: 349801-357578 Solanum lycopersicum
Solyc03g005460.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 357079-357578 Solanum lycopersicum
Solyc03g005460.2 0.5kb downstream 0.5kb downstream 7778 true SL2.50ch03: 349301-357078 Solanum lycopersicum
Solyc03g005460.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 349301-349800 Solanum lycopersicum
Solyc03g005460.2 1.0kb upstream 1.0kb upstream 8278 true SL2.50ch03: 349801-358078 Solanum lycopersicum
Solyc03g005460.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 357079-358078 Solanum lycopersicum
Solyc03g005460.2 1.0kb downstream 1.0kb downstream 8278 true SL2.50ch03: 348801-357078 Solanum lycopersicum
Solyc03g005460.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 348801-349800 Solanum lycopersicum
Solyc03g005460.2 2.0kb upstream 2.0kb upstream 9278 true SL2.50ch03: 349801-359078 Solanum lycopersicum
Solyc03g005460.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 357079-359078 Solanum lycopersicum
Solyc03g005460.2 2.0kb downstream 2.0kb downstream 9278 true SL2.50ch03: 347801-357078 Solanum lycopersicum
Solyc03g005460.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 347801-349800 Solanum lycopersicum
Solyc03g005460.2 5.0kb upstream 5.0kb upstream 12278 true SL2.50ch03: 349801-362078 Solanum lycopersicum
Solyc03g005460.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 357079-362078 Solanum lycopersicum
Solyc03g005460.2 5.0kb downstream 5.0kb downstream 12278 true SL2.50ch03: 344801-357078 Solanum lycopersicum
Solyc03g005460.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 344801-349800 Solanum lycopersicum
Solyc03g005460.2 10.0kb upstream 10.0kb upstream 17278 true SL2.50ch03: 349801-367078 Solanum lycopersicum
Solyc03g005460.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 357079-367078 Solanum lycopersicum
Solyc03g005460.2 10.0kb downstream 10.0kb downstream 17278 true SL2.50ch03: 339801-357078 Solanum lycopersicum
Solyc03g005460.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 339801-349800 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471713 5263 Asterids View MSA
123739188 5271 Pentapetalae View MSA
122788458 5272 Eudicot View MSA
122044838 5273 Angiosperm View MSA
121345096 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain