Gene : Solyc03g005410.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K00981 - phosphatidate cytidylyltransferase (E2.7.7.41, CDS1, CDS2, cdsA) Description:  Phosphatidate cytidylyltransferase (AHRD V1 **** B9RXC8_RICCO); contains Interpro domain(s) IPR016720 Phosphatidate cytidylyltransferase, eukaryota
Genomic Order:  42 Name:  ? Solyc03g005410.2
Secondary Identifier:  ? PAC:36135236
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY0-1319 Solanum lycopersicum pathologic  
Slycopersicum PWY4FS-7 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g005410.2 0.5kb upstream 0.5kb upstream 16225 true SL2.50ch03: 272416-288640 Solanum lycopersicum
Solyc03g005410.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 288141-288640 Solanum lycopersicum
Solyc03g005410.2 0.5kb downstream 0.5kb downstream 16225 true SL2.50ch03: 271916-288140 Solanum lycopersicum
Solyc03g005410.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 271916-272415 Solanum lycopersicum
Solyc03g005410.2 1.0kb upstream 1.0kb upstream 16725 true SL2.50ch03: 272416-289140 Solanum lycopersicum
Solyc03g005410.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 288141-289140 Solanum lycopersicum
Solyc03g005410.2 1.0kb downstream 1.0kb downstream 16725 true SL2.50ch03: 271416-288140 Solanum lycopersicum
Solyc03g005410.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 271416-272415 Solanum lycopersicum
Solyc03g005410.2 2.0kb upstream 2.0kb upstream 17725 true SL2.50ch03: 272416-290140 Solanum lycopersicum
Solyc03g005410.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 288141-290140 Solanum lycopersicum
Solyc03g005410.2 2.0kb downstream 2.0kb downstream 17725 true SL2.50ch03: 270416-288140 Solanum lycopersicum
Solyc03g005410.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 270416-272415 Solanum lycopersicum
Solyc03g005410.2 5.0kb upstream 5.0kb upstream 20725 true SL2.50ch03: 272416-293140 Solanum lycopersicum
Solyc03g005410.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 288141-293140 Solanum lycopersicum
Solyc03g005410.2 5.0kb downstream 5.0kb downstream 20725 true SL2.50ch03: 267416-288140 Solanum lycopersicum
Solyc03g005410.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 267416-272415 Solanum lycopersicum
Solyc03g005410.2 10.0kb upstream 10.0kb upstream 25725 true SL2.50ch03: 272416-298140 Solanum lycopersicum
Solyc03g005410.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 288141-298140 Solanum lycopersicum
Solyc03g005410.2 10.0kb downstream 10.0kb downstream 25725 true SL2.50ch03: 262416-288140 Solanum lycopersicum
Solyc03g005410.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 262416-272415 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478182 5263 Asterids View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain