Gene : Solyc03g007600.2 S. lycopersicum ITAG2.4
Description:  Pentatricopeptide repeat-containing protein At4g21190 (AHRD V1 ***- PP332_ARATH); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat Genomic Order:  261
Name:  ? Solyc03g007600.2 Secondary Identifier:  ? PAC:36134275
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g007600.2 0.5kb upstream 0.5kb upstream 3934 true SL2.50ch03: 2142314-2146247 Solanum lycopersicum
Solyc03g007600.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 2142314-2142813 Solanum lycopersicum
Solyc03g007600.2 0.5kb downstream 0.5kb downstream 3934 true SL2.50ch03: 2142814-2146747 Solanum lycopersicum
Solyc03g007600.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 2146248-2146747 Solanum lycopersicum
Solyc03g007600.2 1.0kb upstream 1.0kb upstream 4434 true SL2.50ch03: 2141814-2146247 Solanum lycopersicum
Solyc03g007600.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 2141814-2142813 Solanum lycopersicum
Solyc03g007600.2 1.0kb downstream 1.0kb downstream 4434 true SL2.50ch03: 2142814-2147247 Solanum lycopersicum
Solyc03g007600.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 2146248-2147247 Solanum lycopersicum
Solyc03g007600.2 2.0kb upstream 2.0kb upstream 5434 true SL2.50ch03: 2140814-2146247 Solanum lycopersicum
Solyc03g007600.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 2140814-2142813 Solanum lycopersicum
Solyc03g007600.2 2.0kb downstream 2.0kb downstream 5434 true SL2.50ch03: 2142814-2148247 Solanum lycopersicum
Solyc03g007600.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 2146248-2148247 Solanum lycopersicum
Solyc03g007600.2 5.0kb upstream 5.0kb upstream 8434 true SL2.50ch03: 2137814-2146247 Solanum lycopersicum
Solyc03g007600.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 2137814-2142813 Solanum lycopersicum
Solyc03g007600.2 5.0kb downstream 5.0kb downstream 8434 true SL2.50ch03: 2142814-2151247 Solanum lycopersicum
Solyc03g007600.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 2146248-2151247 Solanum lycopersicum
Solyc03g007600.2 10.0kb upstream 10.0kb upstream 13434 true SL2.50ch03: 2132814-2146247 Solanum lycopersicum
Solyc03g007600.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 2132814-2142813 Solanum lycopersicum
Solyc03g007600.2 10.0kb downstream 10.0kb downstream 13434 true SL2.50ch03: 2142814-2156247 Solanum lycopersicum
Solyc03g007600.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 2146248-2156247 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474652 5263 Asterids View MSA
123749334 5271 Pentapetalae View MSA
122792381 5272 Eudicot View MSA
122041960 5273 Angiosperm View MSA
121348427 5274 Embryophyte View MSA
123380862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain