Gene : Solyc03g013040.1 S. lycopersicum ITAG2.4
Defline:  (1 of 9) PF04450 - Peptidase of plants and bacteria (BSP) Description:  Peptidase M (Fragment) (AHRD V1 **-- B3VXA8_POPTN); contains Interpro domain(s) IPR007541 Plant Basic Secretory Protein
Genomic Order:  1306 Name:  ? Solyc03g013040.1
Secondary Identifier:  ? PAC:36135805
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g013040.1 0.5kb upstream 0.5kb upstream 1758 true SL2.50ch03: 47681117-47682874 Solanum lycopersicum
Solyc03g013040.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 47681117-47681616 Solanum lycopersicum
Solyc03g013040.1 0.5kb downstream 0.5kb downstream 1758 true SL2.50ch03: 47681617-47683374 Solanum lycopersicum
Solyc03g013040.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 47682875-47683374 Solanum lycopersicum
Solyc03g013040.1 1.0kb upstream 1.0kb upstream 2258 true SL2.50ch03: 47680617-47682874 Solanum lycopersicum
Solyc03g013040.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 47680617-47681616 Solanum lycopersicum
Solyc03g013040.1 1.0kb downstream 1.0kb downstream 2258 true SL2.50ch03: 47681617-47683874 Solanum lycopersicum
Solyc03g013040.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 47682875-47683874 Solanum lycopersicum
Solyc03g013040.1 2.0kb upstream 2.0kb upstream 3258 true SL2.50ch03: 47679617-47682874 Solanum lycopersicum
Solyc03g013040.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 47679617-47681616 Solanum lycopersicum
Solyc03g013040.1 2.0kb downstream 2.0kb downstream 3258 true SL2.50ch03: 47681617-47684874 Solanum lycopersicum
Solyc03g013040.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 47682875-47684874 Solanum lycopersicum
Solyc03g013040.1 5.0kb upstream 5.0kb upstream 6258 true SL2.50ch03: 47676617-47682874 Solanum lycopersicum
Solyc03g013040.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 47676617-47681616 Solanum lycopersicum
Solyc03g013040.1 5.0kb downstream 5.0kb downstream 6258 true SL2.50ch03: 47681617-47687874 Solanum lycopersicum
Solyc03g013040.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 47682875-47687874 Solanum lycopersicum
Solyc03g013040.1 10.0kb upstream 10.0kb upstream 11258 true SL2.50ch03: 47671617-47682874 Solanum lycopersicum
Solyc03g013040.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 47671617-47681616 Solanum lycopersicum
Solyc03g013040.1 10.0kb downstream 10.0kb downstream 11258 true SL2.50ch03: 47681617-47692874 Solanum lycopersicum
Solyc03g013040.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 47682875-47692874 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027901 5273 Angiosperm View MSA
121366447 5263 Asterids Singleton cluster - no MSA
123749990 5271 Pentapetalae View MSA
122773402 5272 Eudicot View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain