Gene : Solyc03g006840.2 S. lycopersicum ITAG2.4
Defline:  (1 of 10) PF14309//PF14383 - Domain of unknown function (DUF4378) (DUF4378) // DUF761-associated sequence motif (VARLMGL) Description:  Genomic DNA chromosome 5 P1 clone MTG10 (AHRD V1 ***- Q9FIS0_ARATH)
Genomic Order:  185 Name:  ? Solyc03g006840.2
Secondary Identifier:  ? PAC:36134167
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g006840.2 0.5kb upstream 0.5kb upstream 3349 true SL2.50ch03: 1353400-1356748 Solanum lycopersicum
Solyc03g006840.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 1353400-1353899 Solanum lycopersicum
Solyc03g006840.2 0.5kb downstream 0.5kb downstream 3349 true SL2.50ch03: 1353900-1357248 Solanum lycopersicum
Solyc03g006840.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 1356749-1357248 Solanum lycopersicum
Solyc03g006840.2 1.0kb upstream 1.0kb upstream 3849 true SL2.50ch03: 1352900-1356748 Solanum lycopersicum
Solyc03g006840.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 1352900-1353899 Solanum lycopersicum
Solyc03g006840.2 1.0kb downstream 1.0kb downstream 3849 true SL2.50ch03: 1353900-1357748 Solanum lycopersicum
Solyc03g006840.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 1356749-1357748 Solanum lycopersicum
Solyc03g006840.2 2.0kb upstream 2.0kb upstream 4849 true SL2.50ch03: 1351900-1356748 Solanum lycopersicum
Solyc03g006840.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 1351900-1353899 Solanum lycopersicum
Solyc03g006840.2 2.0kb downstream 2.0kb downstream 4849 true SL2.50ch03: 1353900-1358748 Solanum lycopersicum
Solyc03g006840.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 1356749-1358748 Solanum lycopersicum
Solyc03g006840.2 5.0kb upstream 5.0kb upstream 7849 true SL2.50ch03: 1348900-1356748 Solanum lycopersicum
Solyc03g006840.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 1348900-1353899 Solanum lycopersicum
Solyc03g006840.2 5.0kb downstream 5.0kb downstream 7849 true SL2.50ch03: 1353900-1361748 Solanum lycopersicum
Solyc03g006840.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 1356749-1361748 Solanum lycopersicum
Solyc03g006840.2 10.0kb upstream 10.0kb upstream 12849 true SL2.50ch03: 1343900-1356748 Solanum lycopersicum
Solyc03g006840.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 1343900-1353899 Solanum lycopersicum
Solyc03g006840.2 10.0kb downstream 10.0kb downstream 12849 true SL2.50ch03: 1353900-1366748 Solanum lycopersicum
Solyc03g006840.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 1356749-1366748 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466820 5263 Asterids View MSA
123749389 5271 Pentapetalae View MSA
122793525 5272 Eudicot View MSA
122045763 5273 Angiosperm View MSA
121310498 5274 Embryophyte View MSA
123347966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain