Gene : Solyc03g006820.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10869:SF80 - IRON ION BINDING / OXIDOREDUCTASE Description:  Oxidoreductase 2OG-Fe(II) oxygenase family family (Fragment) (AHRD V1 **-- Q08MC8_STIAU); contains Interpro domain(s) IPR006620 Prolyl 4-hydroxylase, alpha subunit
Genomic Order:  183 Name:  ? Solyc03g006820.2
Secondary Identifier:  ? PAC:36135352
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g006820.2 0.5kb upstream 0.5kb upstream 4255 true SL2.50ch03: 1322822-1327076 Solanum lycopersicum
Solyc03g006820.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 1326577-1327076 Solanum lycopersicum
Solyc03g006820.2 0.5kb downstream 0.5kb downstream 4255 true SL2.50ch03: 1322322-1326576 Solanum lycopersicum
Solyc03g006820.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 1322322-1322821 Solanum lycopersicum
Solyc03g006820.2 1.0kb upstream 1.0kb upstream 4755 true SL2.50ch03: 1322822-1327576 Solanum lycopersicum
Solyc03g006820.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 1326577-1327576 Solanum lycopersicum
Solyc03g006820.2 1.0kb downstream 1.0kb downstream 4755 true SL2.50ch03: 1321822-1326576 Solanum lycopersicum
Solyc03g006820.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 1321822-1322821 Solanum lycopersicum
Solyc03g006820.2 2.0kb upstream 2.0kb upstream 5755 true SL2.50ch03: 1322822-1328576 Solanum lycopersicum
Solyc03g006820.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 1326577-1328576 Solanum lycopersicum
Solyc03g006820.2 2.0kb downstream 2.0kb downstream 5755 true SL2.50ch03: 1320822-1326576 Solanum lycopersicum
Solyc03g006820.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 1320822-1322821 Solanum lycopersicum
Solyc03g006820.2 5.0kb upstream 5.0kb upstream 8755 true SL2.50ch03: 1322822-1331576 Solanum lycopersicum
Solyc03g006820.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 1326577-1331576 Solanum lycopersicum
Solyc03g006820.2 5.0kb downstream 5.0kb downstream 8755 true SL2.50ch03: 1317822-1326576 Solanum lycopersicum
Solyc03g006820.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 1317822-1322821 Solanum lycopersicum
Solyc03g006820.2 10.0kb upstream 10.0kb upstream 13755 true SL2.50ch03: 1322822-1336576 Solanum lycopersicum
Solyc03g006820.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 1326577-1336576 Solanum lycopersicum
Solyc03g006820.2 10.0kb downstream 10.0kb downstream 13755 true SL2.50ch03: 1312822-1326576 Solanum lycopersicum
Solyc03g006820.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 1312822-1322821 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468779 5263 Asterids View MSA
123744389 5271 Pentapetalae View MSA
122789479 5272 Eudicot View MSA
122042956 5273 Angiosperm View MSA
121350444 5274 Embryophyte View MSA
123425265 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain