Gene : Solyc03g007240.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K00797 - spermidine synthase (speE, SRM) Description:  Spermidine synthase 1 (AHRD V1 **** B6TA19_MAIZE); contains Interpro domain(s) IPR001045 Spermine synthase
Genomic Order:  225 Name:  ? Solyc03g007240.2
Secondary Identifier:  ? PAC:36134748
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum BSUBPOLYAMSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum POLYAMINSYN3-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-7528 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g007240.2 0.5kb upstream 0.5kb upstream 6445 true SL2.50ch03: 1795042-1801486 Solanum lycopersicum
Solyc03g007240.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 1800987-1801486 Solanum lycopersicum
Solyc03g007240.2 0.5kb downstream 0.5kb downstream 6445 true SL2.50ch03: 1794542-1800986 Solanum lycopersicum
Solyc03g007240.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 1794542-1795041 Solanum lycopersicum
Solyc03g007240.2 1.0kb upstream 1.0kb upstream 6945 true SL2.50ch03: 1795042-1801986 Solanum lycopersicum
Solyc03g007240.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 1800987-1801986 Solanum lycopersicum
Solyc03g007240.2 1.0kb downstream 1.0kb downstream 6945 true SL2.50ch03: 1794042-1800986 Solanum lycopersicum
Solyc03g007240.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 1794042-1795041 Solanum lycopersicum
Solyc03g007240.2 2.0kb upstream 2.0kb upstream 7945 true SL2.50ch03: 1795042-1802986 Solanum lycopersicum
Solyc03g007240.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 1800987-1802986 Solanum lycopersicum
Solyc03g007240.2 2.0kb downstream 2.0kb downstream 7945 true SL2.50ch03: 1793042-1800986 Solanum lycopersicum
Solyc03g007240.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 1793042-1795041 Solanum lycopersicum
Solyc03g007240.2 5.0kb upstream 5.0kb upstream 10945 true SL2.50ch03: 1795042-1805986 Solanum lycopersicum
Solyc03g007240.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 1800987-1805986 Solanum lycopersicum
Solyc03g007240.2 5.0kb downstream 5.0kb downstream 10945 true SL2.50ch03: 1790042-1800986 Solanum lycopersicum
Solyc03g007240.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 1790042-1795041 Solanum lycopersicum
Solyc03g007240.2 10.0kb upstream 10.0kb upstream 15945 true SL2.50ch03: 1795042-1810986 Solanum lycopersicum
Solyc03g007240.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 1800987-1810986 Solanum lycopersicum
Solyc03g007240.2 10.0kb downstream 10.0kb downstream 15945 true SL2.50ch03: 1785042-1800986 Solanum lycopersicum
Solyc03g007240.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 1785042-1795041 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473129 5263 Asterids View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain