Gene : Solyc07g065640.2 S. lycopersicum ITAG2.4
Defline:  (1 of 10) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Description:  RPM1 interacting protein 4 transcript 2 (AHRD V1 *-*- D2J0U4_9ASTR); contains Interpro domain(s) IPR008700 Defence response, Rin4
Genomic Order:  2391 Name:  ? Solyc07g065640.2
Secondary Identifier:  ? PAC:36160316
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g065640.2 0.5kb upstream 0.5kb upstream 5275 true SL2.50ch07: 67336088-67341362 Solanum lycopersicum
Solyc07g065640.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 67336088-67336587 Solanum lycopersicum
Solyc07g065640.2 0.5kb downstream 0.5kb downstream 5275 true SL2.50ch07: 67336588-67341862 Solanum lycopersicum
Solyc07g065640.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 67341363-67341862 Solanum lycopersicum
Solyc07g065640.2 1.0kb upstream 1.0kb upstream 5775 true SL2.50ch07: 67335588-67341362 Solanum lycopersicum
Solyc07g065640.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 67335588-67336587 Solanum lycopersicum
Solyc07g065640.2 1.0kb downstream 1.0kb downstream 5775 true SL2.50ch07: 67336588-67342362 Solanum lycopersicum
Solyc07g065640.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 67341363-67342362 Solanum lycopersicum
Solyc07g065640.2 2.0kb upstream 2.0kb upstream 6775 true SL2.50ch07: 67334588-67341362 Solanum lycopersicum
Solyc07g065640.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 67334588-67336587 Solanum lycopersicum
Solyc07g065640.2 2.0kb downstream 2.0kb downstream 6775 true SL2.50ch07: 67336588-67343362 Solanum lycopersicum
Solyc07g065640.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 67341363-67343362 Solanum lycopersicum
Solyc07g065640.2 5.0kb upstream 5.0kb upstream 9775 true SL2.50ch07: 67331588-67341362 Solanum lycopersicum
Solyc07g065640.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 67331588-67336587 Solanum lycopersicum
Solyc07g065640.2 5.0kb downstream 5.0kb downstream 9775 true SL2.50ch07: 67336588-67346362 Solanum lycopersicum
Solyc07g065640.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 67341363-67346362 Solanum lycopersicum
Solyc07g065640.2 10.0kb upstream 10.0kb upstream 14775 true SL2.50ch07: 67326588-67341362 Solanum lycopersicum
Solyc07g065640.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 67326588-67336587 Solanum lycopersicum
Solyc07g065640.2 10.0kb downstream 10.0kb downstream 14775 true SL2.50ch07: 67336588-67351362 Solanum lycopersicum
Solyc07g065640.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 67341363-67351362 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479350 5263 Asterids View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain