Gene : Solyc03g114340.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Description:  1-deoxy-D-xylulose-5-phosphate reductoisomerase (AHRD V1 **** Q947C3_SOLLC); contains Interpro domain(s) IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase
Genomic Order:  2479 Name:  ? Solyc03g114340.2
Secondary Identifier:  ? PAC:36134247
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7560 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g114340.2 0.5kb upstream 0.5kb upstream 5980 true SL2.50ch03: 64347174-64353153 Solanum lycopersicum
Solyc03g114340.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 64347174-64347673 Solanum lycopersicum
Solyc03g114340.2 0.5kb downstream 0.5kb downstream 5980 true SL2.50ch03: 64347674-64353653 Solanum lycopersicum
Solyc03g114340.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 64353154-64353653 Solanum lycopersicum
Solyc03g114340.2 1.0kb upstream 1.0kb upstream 6480 true SL2.50ch03: 64346674-64353153 Solanum lycopersicum
Solyc03g114340.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 64346674-64347673 Solanum lycopersicum
Solyc03g114340.2 1.0kb downstream 1.0kb downstream 6480 true SL2.50ch03: 64347674-64354153 Solanum lycopersicum
Solyc03g114340.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 64353154-64354153 Solanum lycopersicum
Solyc03g114340.2 2.0kb upstream 2.0kb upstream 7480 true SL2.50ch03: 64345674-64353153 Solanum lycopersicum
Solyc03g114340.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 64345674-64347673 Solanum lycopersicum
Solyc03g114340.2 2.0kb downstream 2.0kb downstream 7480 true SL2.50ch03: 64347674-64355153 Solanum lycopersicum
Solyc03g114340.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 64353154-64355153 Solanum lycopersicum
Solyc03g114340.2 5.0kb upstream 5.0kb upstream 10480 true SL2.50ch03: 64342674-64353153 Solanum lycopersicum
Solyc03g114340.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 64342674-64347673 Solanum lycopersicum
Solyc03g114340.2 5.0kb downstream 5.0kb downstream 10480 true SL2.50ch03: 64347674-64358153 Solanum lycopersicum
Solyc03g114340.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 64353154-64358153 Solanum lycopersicum
Solyc03g114340.2 10.0kb upstream 10.0kb upstream 15480 true SL2.50ch03: 64337674-64353153 Solanum lycopersicum
Solyc03g114340.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 64337674-64347673 Solanum lycopersicum
Solyc03g114340.2 10.0kb downstream 10.0kb downstream 15480 true SL2.50ch03: 64347674-64363153 Solanum lycopersicum
Solyc03g114340.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 64353154-64363153 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
121467181 5263 Asterids View MSA
123736883 5271 Pentapetalae View MSA
122791920 5272 Eudicot View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain