Gene : Solyc03g114140.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE 2 Description:  Rna-dependent RNA polymerase (AHRD V1 ***- B9IEP4_POPTR); contains Interpro domain(s) IPR007855 RNA-dependent RNA polymerase, eukaryotic-type
Genomic Order:  2459 Name:  ? Solyc03g114140.2
Secondary Identifier:  ? PAC:36136793
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g114140.2 0.5kb upstream 0.5kb upstream 6200 true SL2.50ch03: 64151851-64158050 Solanum lycopersicum
Solyc03g114140.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 64157551-64158050 Solanum lycopersicum
Solyc03g114140.2 0.5kb downstream 0.5kb downstream 6200 true SL2.50ch03: 64151351-64157550 Solanum lycopersicum
Solyc03g114140.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 64151351-64151850 Solanum lycopersicum
Solyc03g114140.2 1.0kb upstream 1.0kb upstream 6700 true SL2.50ch03: 64151851-64158550 Solanum lycopersicum
Solyc03g114140.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 64157551-64158550 Solanum lycopersicum
Solyc03g114140.2 1.0kb downstream 1.0kb downstream 6700 true SL2.50ch03: 64150851-64157550 Solanum lycopersicum
Solyc03g114140.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 64150851-64151850 Solanum lycopersicum
Solyc03g114140.2 2.0kb upstream 2.0kb upstream 7700 true SL2.50ch03: 64151851-64159550 Solanum lycopersicum
Solyc03g114140.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 64157551-64159550 Solanum lycopersicum
Solyc03g114140.2 2.0kb downstream 2.0kb downstream 7700 true SL2.50ch03: 64149851-64157550 Solanum lycopersicum
Solyc03g114140.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 64149851-64151850 Solanum lycopersicum
Solyc03g114140.2 5.0kb upstream 5.0kb upstream 10700 true SL2.50ch03: 64151851-64162550 Solanum lycopersicum
Solyc03g114140.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 64157551-64162550 Solanum lycopersicum
Solyc03g114140.2 5.0kb downstream 5.0kb downstream 10700 true SL2.50ch03: 64146851-64157550 Solanum lycopersicum
Solyc03g114140.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 64146851-64151850 Solanum lycopersicum
Solyc03g114140.2 10.0kb upstream 10.0kb upstream 15700 true SL2.50ch03: 64151851-64167550 Solanum lycopersicum
Solyc03g114140.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 64157551-64167550 Solanum lycopersicum
Solyc03g114140.2 10.0kb downstream 10.0kb downstream 15700 true SL2.50ch03: 64141851-64157550 Solanum lycopersicum
Solyc03g114140.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 64141851-64151850 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474006 5263 Asterids View MSA
123747025 5271 Pentapetalae View MSA
122788970 5272 Eudicot View MSA
122044390 5273 Angiosperm View MSA
121351040 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain