Gene : Solyc03g113490.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 1.1.99.35 - Soluble quinoprotein glucose dehydrogenase / Soluble glucose dehydrogenase Description:  Hedgehog-interacting protein 1 (Fragment) (AHRD V1 *--- A9J6P8_9ROSI); contains Interpro domain(s) IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase
Genomic Order:  2394 Name:  ? Solyc03g113490.2
Secondary Identifier:  ? PAC:36136984
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLUCOSE1PMETAB-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g113490.2 0.5kb upstream 0.5kb upstream 4228 true SL2.50ch03: 63615521-63619748 Solanum lycopersicum
Solyc03g113490.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 63615521-63616020 Solanum lycopersicum
Solyc03g113490.2 0.5kb downstream 0.5kb downstream 4228 true SL2.50ch03: 63616021-63620248 Solanum lycopersicum
Solyc03g113490.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 63619749-63620248 Solanum lycopersicum
Solyc03g113490.2 1.0kb upstream 1.0kb upstream 4728 true SL2.50ch03: 63615021-63619748 Solanum lycopersicum
Solyc03g113490.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 63615021-63616020 Solanum lycopersicum
Solyc03g113490.2 1.0kb downstream 1.0kb downstream 4728 true SL2.50ch03: 63616021-63620748 Solanum lycopersicum
Solyc03g113490.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 63619749-63620748 Solanum lycopersicum
Solyc03g113490.2 2.0kb upstream 2.0kb upstream 5728 true SL2.50ch03: 63614021-63619748 Solanum lycopersicum
Solyc03g113490.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 63614021-63616020 Solanum lycopersicum
Solyc03g113490.2 2.0kb downstream 2.0kb downstream 5728 true SL2.50ch03: 63616021-63621748 Solanum lycopersicum
Solyc03g113490.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 63619749-63621748 Solanum lycopersicum
Solyc03g113490.2 5.0kb upstream 5.0kb upstream 8728 true SL2.50ch03: 63611021-63619748 Solanum lycopersicum
Solyc03g113490.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 63611021-63616020 Solanum lycopersicum
Solyc03g113490.2 5.0kb downstream 5.0kb downstream 8728 true SL2.50ch03: 63616021-63624748 Solanum lycopersicum
Solyc03g113490.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 63619749-63624748 Solanum lycopersicum
Solyc03g113490.2 10.0kb upstream 10.0kb upstream 13728 true SL2.50ch03: 63606021-63619748 Solanum lycopersicum
Solyc03g113490.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 63606021-63616020 Solanum lycopersicum
Solyc03g113490.2 10.0kb downstream 10.0kb downstream 13728 true SL2.50ch03: 63616021-63629748 Solanum lycopersicum
Solyc03g113490.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 63619749-63629748 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478734 5263 Asterids View MSA
123749936 5271 Pentapetalae View MSA
122794140 5272 Eudicot View MSA
122045052 5273 Angiosperm View MSA
121344764 5274 Embryophyte View MSA
123380098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain