Gene : Solyc03g113380.2 S. lycopersicum ITAG2.4
Defline:  (1 of 174) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KS48_ARALY); contains Interpro domain(s) IPR002625 Smr protein/MutS2 C-terminal
Genomic Order:  2383 Name:  ? Solyc03g113380.2
Secondary Identifier:  ? PAC:36134478
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g113380.2 0.5kb upstream 0.5kb upstream 6941 true SL2.50ch03: 63526584-63533524 Solanum lycopersicum
Solyc03g113380.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 63533025-63533524 Solanum lycopersicum
Solyc03g113380.2 0.5kb downstream 0.5kb downstream 6941 true SL2.50ch03: 63526084-63533024 Solanum lycopersicum
Solyc03g113380.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 63526084-63526583 Solanum lycopersicum
Solyc03g113380.2 1.0kb upstream 1.0kb upstream 7441 true SL2.50ch03: 63526584-63534024 Solanum lycopersicum
Solyc03g113380.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 63533025-63534024 Solanum lycopersicum
Solyc03g113380.2 1.0kb downstream 1.0kb downstream 7441 true SL2.50ch03: 63525584-63533024 Solanum lycopersicum
Solyc03g113380.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 63525584-63526583 Solanum lycopersicum
Solyc03g113380.2 2.0kb upstream 2.0kb upstream 8441 true SL2.50ch03: 63526584-63535024 Solanum lycopersicum
Solyc03g113380.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 63533025-63535024 Solanum lycopersicum
Solyc03g113380.2 2.0kb downstream 2.0kb downstream 8441 true SL2.50ch03: 63524584-63533024 Solanum lycopersicum
Solyc03g113380.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 63524584-63526583 Solanum lycopersicum
Solyc03g113380.2 5.0kb upstream 5.0kb upstream 11441 true SL2.50ch03: 63526584-63538024 Solanum lycopersicum
Solyc03g113380.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 63533025-63538024 Solanum lycopersicum
Solyc03g113380.2 5.0kb downstream 5.0kb downstream 11441 true SL2.50ch03: 63521584-63533024 Solanum lycopersicum
Solyc03g113380.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 63521584-63526583 Solanum lycopersicum
Solyc03g113380.2 10.0kb upstream 10.0kb upstream 16441 true SL2.50ch03: 63526584-63543024 Solanum lycopersicum
Solyc03g113380.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 63533025-63543024 Solanum lycopersicum
Solyc03g113380.2 10.0kb downstream 10.0kb downstream 16441 true SL2.50ch03: 63516584-63533024 Solanum lycopersicum
Solyc03g113380.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 63516584-63526583 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471587 5263 Asterids View MSA
123739123 5271 Pentapetalae View MSA
122794218 5272 Eudicot View MSA
122042407 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain