Gene : Solyc03g115540.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR12565:SF165 - TRANSCRIPTION FACTOR PIF7 Description:  BHLH transcription factor (AHRD V1 *-*- B6TXR4_MAIZE); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Genomic Order:  2599 Name:  ? Solyc03g115540.1
Secondary Identifier:  ? PAC:36135802
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g115540.1 0.5kb upstream 0.5kb upstream 2736 true SL2.50ch03: 65211469-65214204 Solanum lycopersicum
Solyc03g115540.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 65211469-65211968 Solanum lycopersicum
Solyc03g115540.1 0.5kb downstream 0.5kb downstream 2736 true SL2.50ch03: 65211969-65214704 Solanum lycopersicum
Solyc03g115540.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 65214205-65214704 Solanum lycopersicum
Solyc03g115540.1 1.0kb upstream 1.0kb upstream 3236 true SL2.50ch03: 65210969-65214204 Solanum lycopersicum
Solyc03g115540.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 65210969-65211968 Solanum lycopersicum
Solyc03g115540.1 1.0kb downstream 1.0kb downstream 3236 true SL2.50ch03: 65211969-65215204 Solanum lycopersicum
Solyc03g115540.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 65214205-65215204 Solanum lycopersicum
Solyc03g115540.1 2.0kb upstream 2.0kb upstream 4236 true SL2.50ch03: 65209969-65214204 Solanum lycopersicum
Solyc03g115540.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 65209969-65211968 Solanum lycopersicum
Solyc03g115540.1 2.0kb downstream 2.0kb downstream 4236 true SL2.50ch03: 65211969-65216204 Solanum lycopersicum
Solyc03g115540.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 65214205-65216204 Solanum lycopersicum
Solyc03g115540.1 5.0kb upstream 5.0kb upstream 7236 true SL2.50ch03: 65206969-65214204 Solanum lycopersicum
Solyc03g115540.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 65206969-65211968 Solanum lycopersicum
Solyc03g115540.1 5.0kb downstream 5.0kb downstream 7236 true SL2.50ch03: 65211969-65219204 Solanum lycopersicum
Solyc03g115540.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 65214205-65219204 Solanum lycopersicum
Solyc03g115540.1 10.0kb upstream 10.0kb upstream 12236 true SL2.50ch03: 65201969-65214204 Solanum lycopersicum
Solyc03g115540.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 65201969-65211968 Solanum lycopersicum
Solyc03g115540.1 10.0kb downstream 10.0kb downstream 12236 true SL2.50ch03: 65211969-65224204 Solanum lycopersicum
Solyc03g115540.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 65214205-65224204 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479451 5263 Asterids View MSA
123749282 5271 Pentapetalae View MSA
122787317 5272 Eudicot View MSA
122050189 5273 Angiosperm View MSA
121311789 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain