Gene : Solyc03g115910.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED Description:  MADS-box transcription factor 1 (AHRD V1 *-*- D1MFS6_HEVBR); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box
Genomic Order:  2636 Name:  ? Solyc03g115910.1
Secondary Identifier:  ? PAC:36135267
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g115910.1 0.5kb upstream 0.5kb upstream 5592 true SL2.50ch03: 65493107-65498698 Solanum lycopersicum
Solyc03g115910.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 65498199-65498698 Solanum lycopersicum
Solyc03g115910.1 0.5kb downstream 0.5kb downstream 5592 true SL2.50ch03: 65492607-65498198 Solanum lycopersicum
Solyc03g115910.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 65492607-65493106 Solanum lycopersicum
Solyc03g115910.1 1.0kb upstream 1.0kb upstream 6092 true SL2.50ch03: 65493107-65499198 Solanum lycopersicum
Solyc03g115910.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 65498199-65499198 Solanum lycopersicum
Solyc03g115910.1 1.0kb downstream 1.0kb downstream 6092 true SL2.50ch03: 65492107-65498198 Solanum lycopersicum
Solyc03g115910.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 65492107-65493106 Solanum lycopersicum
Solyc03g115910.1 2.0kb upstream 2.0kb upstream 7092 true SL2.50ch03: 65493107-65500198 Solanum lycopersicum
Solyc03g115910.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 65498199-65500198 Solanum lycopersicum
Solyc03g115910.1 2.0kb downstream 2.0kb downstream 7092 true SL2.50ch03: 65491107-65498198 Solanum lycopersicum
Solyc03g115910.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 65491107-65493106 Solanum lycopersicum
Solyc03g115910.1 5.0kb upstream 5.0kb upstream 10092 true SL2.50ch03: 65493107-65503198 Solanum lycopersicum
Solyc03g115910.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 65498199-65503198 Solanum lycopersicum
Solyc03g115910.1 5.0kb downstream 5.0kb downstream 10092 true SL2.50ch03: 65488107-65498198 Solanum lycopersicum
Solyc03g115910.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 65488107-65493106 Solanum lycopersicum
Solyc03g115910.1 10.0kb upstream 10.0kb upstream 15092 true SL2.50ch03: 65493107-65508198 Solanum lycopersicum
Solyc03g115910.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 65498199-65508198 Solanum lycopersicum
Solyc03g115910.1 10.0kb downstream 10.0kb downstream 15092 true SL2.50ch03: 65483107-65498198 Solanum lycopersicum
Solyc03g115910.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 65483107-65493106 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469509 5263 Asterids View MSA
123742642 5271 Pentapetalae View MSA
122791202 5272 Eudicot View MSA
122050633 5273 Angiosperm View MSA
121350455 5274 Embryophyte View MSA
123427239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain