Gene : Solyc03g115740.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K08238 - xyloglucan 6-xylosyltransferase [EC:2.4.2.39] Xyl a1-6 Glc (XXT) Description:  Alpha-1 6-xylosyltransferase (AHRD V1 **-* Q5TIN5_VITVI); contains Interpro domain(s) IPR008630 Galactosyl transferase
Genomic Order:  2619 Name:  ? Solyc03g115740.1
Secondary Identifier:  ? PAC:36134448
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5936 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g115740.1 0.5kb upstream 0.5kb upstream 1853 true SL2.50ch03: 65366902-65368754 Solanum lycopersicum
Solyc03g115740.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 65368255-65368754 Solanum lycopersicum
Solyc03g115740.1 0.5kb downstream 0.5kb downstream 1853 true SL2.50ch03: 65366402-65368254 Solanum lycopersicum
Solyc03g115740.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 65366402-65366901 Solanum lycopersicum
Solyc03g115740.1 1.0kb upstream 1.0kb upstream 2353 true SL2.50ch03: 65366902-65369254 Solanum lycopersicum
Solyc03g115740.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 65368255-65369254 Solanum lycopersicum
Solyc03g115740.1 1.0kb downstream 1.0kb downstream 2353 true SL2.50ch03: 65365902-65368254 Solanum lycopersicum
Solyc03g115740.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 65365902-65366901 Solanum lycopersicum
Solyc03g115740.1 2.0kb upstream 2.0kb upstream 3353 true SL2.50ch03: 65366902-65370254 Solanum lycopersicum
Solyc03g115740.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 65368255-65370254 Solanum lycopersicum
Solyc03g115740.1 2.0kb downstream 2.0kb downstream 3353 true SL2.50ch03: 65364902-65368254 Solanum lycopersicum
Solyc03g115740.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 65364902-65366901 Solanum lycopersicum
Solyc03g115740.1 5.0kb upstream 5.0kb upstream 6353 true SL2.50ch03: 65366902-65373254 Solanum lycopersicum
Solyc03g115740.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 65368255-65373254 Solanum lycopersicum
Solyc03g115740.1 5.0kb downstream 5.0kb downstream 6353 true SL2.50ch03: 65361902-65368254 Solanum lycopersicum
Solyc03g115740.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 65361902-65366901 Solanum lycopersicum
Solyc03g115740.1 10.0kb upstream 10.0kb upstream 11353 true SL2.50ch03: 65366902-65378254 Solanum lycopersicum
Solyc03g115740.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 65368255-65378254 Solanum lycopersicum
Solyc03g115740.1 10.0kb downstream 10.0kb downstream 11353 true SL2.50ch03: 65356902-65368254 Solanum lycopersicum
Solyc03g115740.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 65356902-65366901 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479503 5263 Asterids View MSA
123741049 5271 Pentapetalae View MSA
122787674 5272 Eudicot View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain