Gene : Solyc03g114640.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K04773 - protease IV [EC:3.4.21.-] (sppA) Description:  Signal peptide peptidase SppA type (AHRD V1 ***- Q01NK5_SOLUE); contains Interpro domain(s) IPR004635 Peptidase S49, SppA
Genomic Order:  2509 Name:  ? Solyc03g114640.2
Secondary Identifier:  ? PAC:36136550
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g114640.2 0.5kb upstream 0.5kb upstream 12986 true SL2.50ch03: 64558180-64571165 Solanum lycopersicum
Solyc03g114640.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 64558180-64558679 Solanum lycopersicum
Solyc03g114640.2 0.5kb downstream 0.5kb downstream 12986 true SL2.50ch03: 64558680-64571665 Solanum lycopersicum
Solyc03g114640.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 64571166-64571665 Solanum lycopersicum
Solyc03g114640.2 1.0kb upstream 1.0kb upstream 13486 true SL2.50ch03: 64557680-64571165 Solanum lycopersicum
Solyc03g114640.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 64557680-64558679 Solanum lycopersicum
Solyc03g114640.2 1.0kb downstream 1.0kb downstream 13486 true SL2.50ch03: 64558680-64572165 Solanum lycopersicum
Solyc03g114640.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 64571166-64572165 Solanum lycopersicum
Solyc03g114640.2 2.0kb upstream 2.0kb upstream 14486 true SL2.50ch03: 64556680-64571165 Solanum lycopersicum
Solyc03g114640.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 64556680-64558679 Solanum lycopersicum
Solyc03g114640.2 2.0kb downstream 2.0kb downstream 14486 true SL2.50ch03: 64558680-64573165 Solanum lycopersicum
Solyc03g114640.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 64571166-64573165 Solanum lycopersicum
Solyc03g114640.2 5.0kb upstream 5.0kb upstream 17486 true SL2.50ch03: 64553680-64571165 Solanum lycopersicum
Solyc03g114640.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 64553680-64558679 Solanum lycopersicum
Solyc03g114640.2 5.0kb downstream 5.0kb downstream 17486 true SL2.50ch03: 64558680-64576165 Solanum lycopersicum
Solyc03g114640.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 64571166-64576165 Solanum lycopersicum
Solyc03g114640.2 10.0kb upstream 10.0kb upstream 22486 true SL2.50ch03: 64548680-64571165 Solanum lycopersicum
Solyc03g114640.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 64548680-64558679 Solanum lycopersicum
Solyc03g114640.2 10.0kb downstream 10.0kb downstream 22486 true SL2.50ch03: 64558680-64581165 Solanum lycopersicum
Solyc03g114640.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 64571166-64581165 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470987 5263 Asterids View MSA
123738820 5271 Pentapetalae View MSA
122785684 5272 Eudicot View MSA
122045424 5273 Angiosperm View MSA
121344928 5274 Embryophyte View MSA
123424112 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain