Gene : Solyc03g114410.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K13123 - G patch domain-containing protein 1 (GPATCH1) Description:  G-patch domain-containing protein (AHRD V1 *-*- C5GVR1_AJEDR); contains Interpro domain(s) IPR011666 Protein of unknown function DUF1604
Genomic Order:  2486 Name:  ? Solyc03g114410.2
Secondary Identifier:  ? PAC:36135248
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g114410.2 0.5kb upstream 0.5kb upstream 15042 true SL2.50ch03: 64405905-64420946 Solanum lycopersicum
Solyc03g114410.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 64405905-64406404 Solanum lycopersicum
Solyc03g114410.2 0.5kb downstream 0.5kb downstream 15042 true SL2.50ch03: 64406405-64421446 Solanum lycopersicum
Solyc03g114410.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 64420947-64421446 Solanum lycopersicum
Solyc03g114410.2 1.0kb upstream 1.0kb upstream 15542 true SL2.50ch03: 64405405-64420946 Solanum lycopersicum
Solyc03g114410.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 64405405-64406404 Solanum lycopersicum
Solyc03g114410.2 1.0kb downstream 1.0kb downstream 15542 true SL2.50ch03: 64406405-64421946 Solanum lycopersicum
Solyc03g114410.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 64420947-64421946 Solanum lycopersicum
Solyc03g114410.2 2.0kb upstream 2.0kb upstream 16542 true SL2.50ch03: 64404405-64420946 Solanum lycopersicum
Solyc03g114410.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 64404405-64406404 Solanum lycopersicum
Solyc03g114410.2 2.0kb downstream 2.0kb downstream 16542 true SL2.50ch03: 64406405-64422946 Solanum lycopersicum
Solyc03g114410.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 64420947-64422946 Solanum lycopersicum
Solyc03g114410.2 5.0kb upstream 5.0kb upstream 19542 true SL2.50ch03: 64401405-64420946 Solanum lycopersicum
Solyc03g114410.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 64401405-64406404 Solanum lycopersicum
Solyc03g114410.2 5.0kb downstream 5.0kb downstream 19542 true SL2.50ch03: 64406405-64425946 Solanum lycopersicum
Solyc03g114410.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 64420947-64425946 Solanum lycopersicum
Solyc03g114410.2 10.0kb upstream 10.0kb upstream 24542 true SL2.50ch03: 64396405-64420946 Solanum lycopersicum
Solyc03g114410.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 64396405-64406404 Solanum lycopersicum
Solyc03g114410.2 10.0kb downstream 10.0kb downstream 24542 true SL2.50ch03: 64406405-64430946 Solanum lycopersicum
Solyc03g114410.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 64420947-64430946 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468217 5263 Asterids View MSA
123746578 5271 Pentapetalae View MSA
122793732 5272 Eudicot View MSA
122044115 5273 Angiosperm View MSA
121345398 5274 Embryophyte View MSA
123424133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain