Gene : Solyc03g115150.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10625:SF102 - HISTONE DEACETYLASE 10 Description:  Histone deacetylase (AHRD V1 **** B9H356_POPTR); contains Interpro domain(s) IPR000286 Histone deacetylase superfamily
Genomic Order:  2560 Name:  ? Solyc03g115150.2
Secondary Identifier:  ? PAC:36136172
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g115150.2 0.5kb upstream 0.5kb upstream 14775 true SL2.50ch03: 64934883-64949657 Solanum lycopersicum
Solyc03g115150.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 64949158-64949657 Solanum lycopersicum
Solyc03g115150.2 0.5kb downstream 0.5kb downstream 14775 true SL2.50ch03: 64934383-64949157 Solanum lycopersicum
Solyc03g115150.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 64934383-64934882 Solanum lycopersicum
Solyc03g115150.2 1.0kb upstream 1.0kb upstream 15275 true SL2.50ch03: 64934883-64950157 Solanum lycopersicum
Solyc03g115150.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 64949158-64950157 Solanum lycopersicum
Solyc03g115150.2 1.0kb downstream 1.0kb downstream 15275 true SL2.50ch03: 64933883-64949157 Solanum lycopersicum
Solyc03g115150.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 64933883-64934882 Solanum lycopersicum
Solyc03g115150.2 2.0kb upstream 2.0kb upstream 16275 true SL2.50ch03: 64934883-64951157 Solanum lycopersicum
Solyc03g115150.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 64949158-64951157 Solanum lycopersicum
Solyc03g115150.2 2.0kb downstream 2.0kb downstream 16275 true SL2.50ch03: 64932883-64949157 Solanum lycopersicum
Solyc03g115150.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 64932883-64934882 Solanum lycopersicum
Solyc03g115150.2 5.0kb upstream 5.0kb upstream 19275 true SL2.50ch03: 64934883-64954157 Solanum lycopersicum
Solyc03g115150.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 64949158-64954157 Solanum lycopersicum
Solyc03g115150.2 5.0kb downstream 5.0kb downstream 19275 true SL2.50ch03: 64929883-64949157 Solanum lycopersicum
Solyc03g115150.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 64929883-64934882 Solanum lycopersicum
Solyc03g115150.2 10.0kb upstream 10.0kb upstream 24275 true SL2.50ch03: 64934883-64959157 Solanum lycopersicum
Solyc03g115150.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 64949158-64959157 Solanum lycopersicum
Solyc03g115150.2 10.0kb downstream 10.0kb downstream 24275 true SL2.50ch03: 64924883-64949157 Solanum lycopersicum
Solyc03g115150.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 64924883-64934882 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466908 5263 Asterids View MSA
123752884 5271 Pentapetalae View MSA
122793476 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain