Gene : Solyc03g098590.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Description:  RING finger protein 13 (AHRD V1 *--- RNF13_CHICK); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
Genomic Order:  2068 Name:  ? Solyc03g098590.2
Secondary Identifier:  ? PAC:36136053
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7511 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g098590.2 0.5kb upstream 0.5kb upstream 4178 true SL2.50ch03: 60896496-60900673 Solanum lycopersicum
Solyc03g098590.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 60896496-60896995 Solanum lycopersicum
Solyc03g098590.2 0.5kb downstream 0.5kb downstream 4178 true SL2.50ch03: 60896996-60901173 Solanum lycopersicum
Solyc03g098590.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 60900674-60901173 Solanum lycopersicum
Solyc03g098590.2 1.0kb upstream 1.0kb upstream 4678 true SL2.50ch03: 60895996-60900673 Solanum lycopersicum
Solyc03g098590.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 60895996-60896995 Solanum lycopersicum
Solyc03g098590.2 1.0kb downstream 1.0kb downstream 4678 true SL2.50ch03: 60896996-60901673 Solanum lycopersicum
Solyc03g098590.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 60900674-60901673 Solanum lycopersicum
Solyc03g098590.2 2.0kb upstream 2.0kb upstream 5678 true SL2.50ch03: 60894996-60900673 Solanum lycopersicum
Solyc03g098590.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 60894996-60896995 Solanum lycopersicum
Solyc03g098590.2 2.0kb downstream 2.0kb downstream 5678 true SL2.50ch03: 60896996-60902673 Solanum lycopersicum
Solyc03g098590.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 60900674-60902673 Solanum lycopersicum
Solyc03g098590.2 5.0kb upstream 5.0kb upstream 8678 true SL2.50ch03: 60891996-60900673 Solanum lycopersicum
Solyc03g098590.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 60891996-60896995 Solanum lycopersicum
Solyc03g098590.2 5.0kb downstream 5.0kb downstream 8678 true SL2.50ch03: 60896996-60905673 Solanum lycopersicum
Solyc03g098590.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 60900674-60905673 Solanum lycopersicum
Solyc03g098590.2 10.0kb upstream 10.0kb upstream 13678 true SL2.50ch03: 60886996-60900673 Solanum lycopersicum
Solyc03g098590.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 60886996-60896995 Solanum lycopersicum
Solyc03g098590.2 10.0kb downstream 10.0kb downstream 13678 true SL2.50ch03: 60896996-60910673 Solanum lycopersicum
Solyc03g098590.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 60900674-60910673 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474640 5263 Asterids View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain