Gene : Solyc03g098300.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) 4.1.1.17 - Ornithine decarboxylase / L-ornithine carboxy-lyase Description:  Ornithine decarboxylase (AHRD V1 **** A2TBH8_THECC); contains Interpro domain(s) IPR002433 Ornithine decarboxylase
Genomic Order:  2041 Name:  ? Solyc03g098300.1
Secondary Identifier:  ? PAC:36135192
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum POLYAMINSYN3-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-46 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g098300.1 0.5kb upstream 0.5kb upstream 1667 true SL2.50ch03: 60642904-60644570 Solanum lycopersicum
Solyc03g098300.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 60642904-60643403 Solanum lycopersicum
Solyc03g098300.1 0.5kb downstream 0.5kb downstream 1667 true SL2.50ch03: 60643404-60645070 Solanum lycopersicum
Solyc03g098300.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 60644571-60645070 Solanum lycopersicum
Solyc03g098300.1 1.0kb upstream 1.0kb upstream 2167 true SL2.50ch03: 60642404-60644570 Solanum lycopersicum
Solyc03g098300.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 60642404-60643403 Solanum lycopersicum
Solyc03g098300.1 1.0kb downstream 1.0kb downstream 2167 true SL2.50ch03: 60643404-60645570 Solanum lycopersicum
Solyc03g098300.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 60644571-60645570 Solanum lycopersicum
Solyc03g098300.1 2.0kb upstream 2.0kb upstream 3167 true SL2.50ch03: 60641404-60644570 Solanum lycopersicum
Solyc03g098300.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 60641404-60643403 Solanum lycopersicum
Solyc03g098300.1 2.0kb downstream 2.0kb downstream 3167 true SL2.50ch03: 60643404-60646570 Solanum lycopersicum
Solyc03g098300.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 60644571-60646570 Solanum lycopersicum
Solyc03g098300.1 5.0kb upstream 5.0kb upstream 6167 true SL2.50ch03: 60638404-60644570 Solanum lycopersicum
Solyc03g098300.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 60638404-60643403 Solanum lycopersicum
Solyc03g098300.1 5.0kb downstream 5.0kb downstream 6167 true SL2.50ch03: 60643404-60649570 Solanum lycopersicum
Solyc03g098300.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 60644571-60649570 Solanum lycopersicum
Solyc03g098300.1 10.0kb upstream 10.0kb upstream 11167 true SL2.50ch03: 60633404-60644570 Solanum lycopersicum
Solyc03g098300.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 60633404-60643403 Solanum lycopersicum
Solyc03g098300.1 10.0kb downstream 10.0kb downstream 11167 true SL2.50ch03: 60643404-60654570 Solanum lycopersicum
Solyc03g098300.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 60644571-60654570 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121385406 5263 Asterids View MSA
123742733 5271 Pentapetalae View MSA
122796086 5272 Eudicot View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain