Gene : Solyc03g097820.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12565//PTHR12565:SF141 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Description:  Transcription factor (AHRD V1 *-** D6MKM4_9ASPA); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding
Genomic Order:  1993 Name:  ? Solyc03g097820.1
Secondary Identifier:  ? PAC:36136185
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g097820.1 0.5kb upstream 0.5kb upstream 2650 true SL2.50ch03: 60145373-60148022 Solanum lycopersicum
Solyc03g097820.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 60147523-60148022 Solanum lycopersicum
Solyc03g097820.1 0.5kb downstream 0.5kb downstream 2650 true SL2.50ch03: 60144873-60147522 Solanum lycopersicum
Solyc03g097820.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 60144873-60145372 Solanum lycopersicum
Solyc03g097820.1 1.0kb upstream 1.0kb upstream 3150 true SL2.50ch03: 60145373-60148522 Solanum lycopersicum
Solyc03g097820.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 60147523-60148522 Solanum lycopersicum
Solyc03g097820.1 1.0kb downstream 1.0kb downstream 3150 true SL2.50ch03: 60144373-60147522 Solanum lycopersicum
Solyc03g097820.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 60144373-60145372 Solanum lycopersicum
Solyc03g097820.1 2.0kb upstream 2.0kb upstream 4150 true SL2.50ch03: 60145373-60149522 Solanum lycopersicum
Solyc03g097820.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 60147523-60149522 Solanum lycopersicum
Solyc03g097820.1 2.0kb downstream 2.0kb downstream 4150 true SL2.50ch03: 60143373-60147522 Solanum lycopersicum
Solyc03g097820.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 60143373-60145372 Solanum lycopersicum
Solyc03g097820.1 5.0kb upstream 5.0kb upstream 7150 true SL2.50ch03: 60145373-60152522 Solanum lycopersicum
Solyc03g097820.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 60147523-60152522 Solanum lycopersicum
Solyc03g097820.1 5.0kb downstream 5.0kb downstream 7150 true SL2.50ch03: 60140373-60147522 Solanum lycopersicum
Solyc03g097820.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 60140373-60145372 Solanum lycopersicum
Solyc03g097820.1 10.0kb upstream 10.0kb upstream 12150 true SL2.50ch03: 60145373-60157522 Solanum lycopersicum
Solyc03g097820.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 60147523-60157522 Solanum lycopersicum
Solyc03g097820.1 10.0kb downstream 10.0kb downstream 12150 true SL2.50ch03: 60135373-60147522 Solanum lycopersicum
Solyc03g097820.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 60135373-60145372 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478269 5263 Asterids View MSA
123746913 5271 Pentapetalae View MSA
122796649 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain