Gene : Solyc03g112590.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF02359//PF02933//PF05496 - Cell division protein 48 (CDC48), N-terminal domain (CDC48_N) // Cell division protein 48 (CDC48), domain 2 (CDC48_2) // Holliday junction DNA helicase ruvB N-terminus (RuvB_N) Description:  Cell division protease ftsH homolog (AHRD V1 *--- FTSH_ODOSI); contains Interpro domain(s) IPR005938 ATPase, AAA-type, CDC48
Genomic Order:  2304 Name:  ? Solyc03g112590.2
Secondary Identifier:  ? PAC:36136909
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g112590.2 0.5kb upstream 0.5kb upstream 11005 true SL2.50ch03: 62976668-62987672 Solanum lycopersicum
Solyc03g112590.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 62987173-62987672 Solanum lycopersicum
Solyc03g112590.2 0.5kb downstream 0.5kb downstream 11005 true SL2.50ch03: 62976168-62987172 Solanum lycopersicum
Solyc03g112590.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 62976168-62976667 Solanum lycopersicum
Solyc03g112590.2 1.0kb upstream 1.0kb upstream 11505 true SL2.50ch03: 62976668-62988172 Solanum lycopersicum
Solyc03g112590.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 62987173-62988172 Solanum lycopersicum
Solyc03g112590.2 1.0kb downstream 1.0kb downstream 11505 true SL2.50ch03: 62975668-62987172 Solanum lycopersicum
Solyc03g112590.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 62975668-62976667 Solanum lycopersicum
Solyc03g112590.2 2.0kb upstream 2.0kb upstream 12505 true SL2.50ch03: 62976668-62989172 Solanum lycopersicum
Solyc03g112590.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 62987173-62989172 Solanum lycopersicum
Solyc03g112590.2 2.0kb downstream 2.0kb downstream 12505 true SL2.50ch03: 62974668-62987172 Solanum lycopersicum
Solyc03g112590.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 62974668-62976667 Solanum lycopersicum
Solyc03g112590.2 5.0kb upstream 5.0kb upstream 15505 true SL2.50ch03: 62976668-62992172 Solanum lycopersicum
Solyc03g112590.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 62987173-62992172 Solanum lycopersicum
Solyc03g112590.2 5.0kb downstream 5.0kb downstream 15505 true SL2.50ch03: 62971668-62987172 Solanum lycopersicum
Solyc03g112590.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 62971668-62976667 Solanum lycopersicum
Solyc03g112590.2 10.0kb upstream 10.0kb upstream 20505 true SL2.50ch03: 62976668-62997172 Solanum lycopersicum
Solyc03g112590.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 62987173-62997172 Solanum lycopersicum
Solyc03g112590.2 10.0kb downstream 10.0kb downstream 20505 true SL2.50ch03: 62966668-62987172 Solanum lycopersicum
Solyc03g112590.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 62966668-62976667 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121413852 5263 Asterids View MSA
123742246 5271 Pentapetalae View MSA
122770246 5272 Eudicot View MSA
122048605 5273 Angiosperm View MSA
121347913 5274 Embryophyte View MSA
123424841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain