Gene : Solyc03g083500.2 S. lycopersicum ITAG2.4
Defline:  (1 of 8) PF07279 - Protein of unknown function (DUF1442) (DUF1442) Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR009902 Protein of unknown function DUF1442
Genomic Order:  1570 Name:  ? Solyc03g083500.2
Secondary Identifier:  ? PAC:36136362
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g083500.2 0.5kb upstream 0.5kb upstream 1359 true SL2.50ch03: 53426341-53427699 Solanum lycopersicum
Solyc03g083500.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 53426341-53426840 Solanum lycopersicum
Solyc03g083500.2 0.5kb downstream 0.5kb downstream 1359 true SL2.50ch03: 53426841-53428199 Solanum lycopersicum
Solyc03g083500.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 53427700-53428199 Solanum lycopersicum
Solyc03g083500.2 1.0kb upstream 1.0kb upstream 1859 true SL2.50ch03: 53425841-53427699 Solanum lycopersicum
Solyc03g083500.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 53425841-53426840 Solanum lycopersicum
Solyc03g083500.2 1.0kb downstream 1.0kb downstream 1859 true SL2.50ch03: 53426841-53428699 Solanum lycopersicum
Solyc03g083500.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 53427700-53428699 Solanum lycopersicum
Solyc03g083500.2 2.0kb upstream 2.0kb upstream 2859 true SL2.50ch03: 53424841-53427699 Solanum lycopersicum
Solyc03g083500.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 53424841-53426840 Solanum lycopersicum
Solyc03g083500.2 2.0kb downstream 2.0kb downstream 2859 true SL2.50ch03: 53426841-53429699 Solanum lycopersicum
Solyc03g083500.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 53427700-53429699 Solanum lycopersicum
Solyc03g083500.2 5.0kb upstream 5.0kb upstream 5859 true SL2.50ch03: 53421841-53427699 Solanum lycopersicum
Solyc03g083500.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 53421841-53426840 Solanum lycopersicum
Solyc03g083500.2 5.0kb downstream 5.0kb downstream 5859 true SL2.50ch03: 53426841-53432699 Solanum lycopersicum
Solyc03g083500.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 53427700-53432699 Solanum lycopersicum
Solyc03g083500.2 10.0kb upstream 10.0kb upstream 10859 true SL2.50ch03: 53416841-53427699 Solanum lycopersicum
Solyc03g083500.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 53416841-53426840 Solanum lycopersicum
Solyc03g083500.2 10.0kb downstream 10.0kb downstream 10859 true SL2.50ch03: 53426841-53437699 Solanum lycopersicum
Solyc03g083500.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 53427700-53437699 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472064 5263 Asterids View MSA
123746429 5271 Pentapetalae View MSA
122795029 5272 Eudicot View MSA
122048699 5273 Angiosperm View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain