Gene : Solyc03g083440.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K00264 - glutamate synthase (NADPH/NADH) (GLT1) Description:  Glutamate synthase (AHRD V1 **** C1E4G5_9CHLO); contains Interpro domain(s) IPR012220 Glutamate synthase, eukaryotic IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1
Genomic Order:  1564 Name:  ? Solyc03g083440.2
Secondary Identifier:  ? PAC:36136761
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLUGLNSYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-3282 Solanum lycopersicum pathologic  
Slycopersicum PWY-6963 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g083440.2 0.5kb upstream 0.5kb upstream 11921 true SL2.50ch03: 53335012-53346932 Solanum lycopersicum
Solyc03g083440.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 53335012-53335511 Solanum lycopersicum
Solyc03g083440.2 0.5kb downstream 0.5kb downstream 11921 true SL2.50ch03: 53335512-53347432 Solanum lycopersicum
Solyc03g083440.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 53346933-53347432 Solanum lycopersicum
Solyc03g083440.2 1.0kb upstream 1.0kb upstream 12421 true SL2.50ch03: 53334512-53346932 Solanum lycopersicum
Solyc03g083440.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 53334512-53335511 Solanum lycopersicum
Solyc03g083440.2 1.0kb downstream 1.0kb downstream 12421 true SL2.50ch03: 53335512-53347932 Solanum lycopersicum
Solyc03g083440.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 53346933-53347932 Solanum lycopersicum
Solyc03g083440.2 2.0kb upstream 2.0kb upstream 13421 true SL2.50ch03: 53333512-53346932 Solanum lycopersicum
Solyc03g083440.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 53333512-53335511 Solanum lycopersicum
Solyc03g083440.2 2.0kb downstream 2.0kb downstream 13421 true SL2.50ch03: 53335512-53348932 Solanum lycopersicum
Solyc03g083440.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 53346933-53348932 Solanum lycopersicum
Solyc03g083440.2 5.0kb upstream 5.0kb upstream 16421 true SL2.50ch03: 53330512-53346932 Solanum lycopersicum
Solyc03g083440.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 53330512-53335511 Solanum lycopersicum
Solyc03g083440.2 5.0kb downstream 5.0kb downstream 16421 true SL2.50ch03: 53335512-53351932 Solanum lycopersicum
Solyc03g083440.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 53346933-53351932 Solanum lycopersicum
Solyc03g083440.2 10.0kb upstream 10.0kb upstream 21421 true SL2.50ch03: 53325512-53346932 Solanum lycopersicum
Solyc03g083440.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 53325512-53335511 Solanum lycopersicum
Solyc03g083440.2 10.0kb downstream 10.0kb downstream 21421 true SL2.50ch03: 53335512-53356932 Solanum lycopersicum
Solyc03g083440.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 53346933-53356932 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469274 5263 Asterids View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain