Gene : Solyc03g093360.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PF06232 - Embryo-specific protein 3, (ATS3) (ATS3) Description:  Wound/stress protein (AHRD V1 **-- Q672Q3_SOLLC); contains Interpro domain(s) IPR001024 Lipoxygenase, LH2
Genomic Order:  1657 Name:  ? Solyc03g093360.2
Secondary Identifier:  ? PAC:36135555
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc03g093360.2 0.5kb upstream 0.5kb upstream 1674 true SL2.50ch03: 54631541-54633214 Solanum lycopersicum
Solyc03g093360.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch03: 54631541-54632040 Solanum lycopersicum
Solyc03g093360.2 0.5kb downstream 0.5kb downstream 1674 true SL2.50ch03: 54632041-54633714 Solanum lycopersicum
Solyc03g093360.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch03: 54633215-54633714 Solanum lycopersicum
Solyc03g093360.2 1.0kb upstream 1.0kb upstream 2174 true SL2.50ch03: 54631041-54633214 Solanum lycopersicum
Solyc03g093360.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch03: 54631041-54632040 Solanum lycopersicum
Solyc03g093360.2 1.0kb downstream 1.0kb downstream 2174 true SL2.50ch03: 54632041-54634214 Solanum lycopersicum
Solyc03g093360.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch03: 54633215-54634214 Solanum lycopersicum
Solyc03g093360.2 2.0kb upstream 2.0kb upstream 3174 true SL2.50ch03: 54630041-54633214 Solanum lycopersicum
Solyc03g093360.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch03: 54630041-54632040 Solanum lycopersicum
Solyc03g093360.2 2.0kb downstream 2.0kb downstream 3174 true SL2.50ch03: 54632041-54635214 Solanum lycopersicum
Solyc03g093360.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch03: 54633215-54635214 Solanum lycopersicum
Solyc03g093360.2 5.0kb upstream 5.0kb upstream 6174 true SL2.50ch03: 54627041-54633214 Solanum lycopersicum
Solyc03g093360.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch03: 54627041-54632040 Solanum lycopersicum
Solyc03g093360.2 5.0kb downstream 5.0kb downstream 6174 true SL2.50ch03: 54632041-54638214 Solanum lycopersicum
Solyc03g093360.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch03: 54633215-54638214 Solanum lycopersicum
Solyc03g093360.2 10.0kb upstream 10.0kb upstream 11174 true SL2.50ch03: 54622041-54633214 Solanum lycopersicum
Solyc03g093360.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch03: 54622041-54632040 Solanum lycopersicum
Solyc03g093360.2 10.0kb downstream 10.0kb downstream 11174 true SL2.50ch03: 54632041-54643214 Solanum lycopersicum
Solyc03g093360.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch03: 54633215-54643214 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121413946 5263 Asterids View MSA
123744078 5271 Pentapetalae View MSA
122795381 5272 Eudicot View MSA
122048242 5273 Angiosperm View MSA
121351079 5274 Embryophyte View MSA
123381999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain